Evidence map›Paper›PMID 35421092›Full record

ArticlePLoS genetics2022

Ubiquitin ligase activity inhibits Cdk5 to control axon termination.

Muriel Desbois, Karla J Opperman, Jonathan Amezquita, Gabriel Gaglio, Oliver Crawley, Brock Grill

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 15 citations in OpenAlex.

  1. Review
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  9. A new dawn beyond lysine ubiquitination.Nature chemical biology · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Muriel DesboisCenter for Integrative Brain Research, Seattle Children's Research Institute, Seattle, Washington, United States of America.ORCID 0000-0002-8070-2525
Karla J OppermanCenter for Integrative Brain Research, Seattle Children's Research Institute, Seattle, Washington, United States of America.ORCID 0000-0001-9545-8361
Jonathan AmezquitaCenter for Integrative Brain Research, Seattle Children's Research Institute, Seattle, Washington, United States of America.ORCID 0000-0002-9491-1862
Gabriel GaglioDepartment of Neuroscience, The Scripps Research Institute, Jupiter, Florida, United States of America.ORCID 0000-0002-7988-2522
Oliver CrawleyInstituto de Neurociencias de Alicante, Universidad Miguel Hernández-CSIC, San Juan de Alicante, Spain.ORCID 0000-0002-5054-0051
Brock GrillCenter for Integrative Brain Research, Seattle Children's Research Institute, Seattle, Washington, United States of America.ORCID 0000-0002-0379-3267
University of Washington · USInstituto de Neurociencias · ESScripps Research Institute · US

Funding

Mechanisms of synapse formation and axon termination in C. elegansR01NS072129 · NINDS · UNIVERSITY OF MINNESOTA · PI GRILL, BROCK · 2011 to 2024
$8.0M
NINDS NIH HHS R01 NS072129
6 · The paper itself

Abstract

The Cdk5 kinase plays prominent roles in nervous system development, plasticity, behavior and disease. It also has important, non-neuronal functions in cancer, the immune system and insulin secretion. At present, we do not fully understand negative regulatory mechanisms that restrict Cdk5. Here, we use Caenorhabditis elegans to show that CDK-5 is inhibited by the RPM-1/FSN-1 ubiquitin ligase complex. This atypical RING ubiquitin ligase is conserved from C. elegans through mammals. Our finding originated from unbiased, in vivo affinity purification proteomics, which identified CDK-5 as a putative RPM-1 substrate. CRISPR-based, native biochemistry showed that CDK-5 interacts with the RPM-1/FSN-1 ubiquitin ligase complex. A CRISPR engineered RPM-1 substrate 'trap' enriched CDK-5 binding, which was mediated by the FSN-1 substrate recognition module. To test the functional genetic relationship between the RPM-1/FSN-1 ubiquitin ligase complex and CDK-5, we evaluated axon termination in mechanosensory neurons and motor neurons. Our results indicate that RPM-1/FSN-1 ubiquitin ligase activity restricts CDK-5 to control axon termination. Collectively, these proteomic, biochemical and genetic results increase our understanding of mechanisms that restrain Cdk5 in the nervous system.

Indexed as

Caenorhabditis elegansCaenorhabditis elegans ProteinsAnimalsAxonsGuanine Nucleotide Exchange FactorsLigasesMammalsMotor NeuronsProteomicsUbiquitinsCaenorhabditis elegans ProteinsGuanine Nucleotide Exchange FactorsLigasesRPM-1 protein, C elegansUbiquitins

Identifiers

PMID35421092
PMCPMC9041834
OpenAlexW4223954862

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.