Evidence map›Paper›PMID 35419538›Full record

ArticleKidney3602021

Clinical Validation of an Immune Quiescence Gene Expression Signature in Kidney Transplantation.

Enver Akalin, Matthew R Weir, Suphamai Bunnapradist, Daniel C Brennan, Rowena Delos Santos, Anthony Langone, Arjang Djamali, Hua Xu, Xia Jin, Sham Dholakia and 2 more

Abstract read
In one paragraph

Article in Kidney360, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Biochemistry and biophysics reports · 2026
    Review
  2. Review
  3. Review
  4. Review
  5. Noninvasive Diagnosis of Kidney Allograft Rejection.Journal of the American Society of Nephrology : JASN · 2025
    Review
  6. Article
  7. Biomarkers of Rejection in Kidney Transplantation.American journal of kidney diseases : the official journal of the National Kidney Foundation · 2025
    Review
  8. Article
  9. Review
  10. Review
  11. Review
  12. European Society of Organ Transplantation Consensus Statement on Testing for Non-Invasive Diagnosis of Kidney Allograft Rejection.Transplant international : official journal of the European Society for Organ Transplantation · 2023
    Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Enver AkalinDivision of Nephrology, Kidney Transplant Program, Montefiore Medical Center, Albert Einstein College of Medicine, Bronx, New York.ORCID 0000-0003-1341-5144
Matthew R WeirDivision of Nephrology, Department of Medicine, University of Maryland School of Medicine, Baltimore, Maryland.ORCID 0000-0001-8820-5702
Suphamai BunnapradistDepartment of Medicine, David Geffen School of Medicine at University of California Los Angeles, Los Angeles, California.
Daniel C BrennanComprehensive Transplant Center, The Johns Hopkins University School of Medicine, Baltimore, Maryland.ORCID 0000-0002-4818-7455
Rowena Delos SantosDivision of Nephrology, Washington University School of Medicine, St. Louis, Missouri.ORCID 0000-0002-8844-6925
Anthony LangoneVanderbilt University Medical Center, Medical Specialties Clinic, Veteran Affairs Hospital Renal Transplant Program, Nashville, Tennessee.
Arjang DjamaliDepartment of Medicine, University of Wisconsin School of Medicine and Public Health, Madison, Wisconsin.ORCID 0000-0001-7675-6128
Hua XuResearch and Development, CareDx, Brisbane, California.
Xia JinResearch and Development, CareDx, Brisbane, California.
Sham DholakiaMedical Affairs, CareDx, South San Francisco, California.ORCID 0000-0002-5788-4420
Robert N WoodwardResearch and Development, CareDx, Brisbane, California.ORCID 0000-0001-7514-498X
Jonathan S BrombergDepartment of Surgery, University of Maryland School of Medicine, Baltimore, Maryland.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Despite advances in immune suppression, kidney allograft rejection and other injuries remain a significant clinical concern, particularly with regards to long-term allograft survival. Evaluation of immune activity can provide information about rejection status and help guide interventions to extend allograft life. Here, we describe the validation of a blood gene expression classifier developed to differentiate immune quiescence from both T cell-mediated rejection (TCMR) and antibody-mediated rejection (ABMR). Methods: A five-gene classifier (DCAF12, MARCH8, FLT3, IL1R2, and PDCD1) was developed on 56 peripheral blood samples and validated on two sample sets independent of the training cohort. The primary validation set comprised 98 quiescence samples and 18 rejection samples: seven TCMR, ten ABMR, and one mixed rejection. The second validation set included eight quiescence and 11 rejection samples: seven TCMR, two ABMR, and two mixed rejection. AlloSure donor-derived cell-free DNA (dd-cfDNA) was also evaluated. Results: AlloMap Kidney classifier scores in the primary validation set differed significantly between quiescence (median, 9.49; IQR, 7.68-11.53) and rejection (median, 13.09; IQR, 11.25-15.28), with Conclusion: Validation of AlloMap Kidney demonstrated the ability to differentiate between rejection and immune quiescence using a range of scores. The diagnostic performance suggests that assessment of the mechanisms of immunologic activity is complementary to allograft injury information derived from AlloSure dd-cfDNA. Together, these biomarkers offer a more comprehensive assessment of allograft health and immune quiescence.

Indexed as

Cell-Free Nucleic AcidsKidney TransplantationAntibodiesGraft RejectionHumansTissue DonorsTranscriptomeAntibodiesCell-Free Nucleic Acidsallograft rejectionantibody-mediated rejectiondonor-derived cell-free DNAgene expression profilingkidney transplantationT cell-mediated rejectiontransplantation

Identifiers

PMID35419538
PMCPMC8986041

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.