Evidence map›Paper›PMID 35418139›Full record

ArticleBiotechnology for biofuels and bioproducts2022

Mechanism of differential expression of β-glucosidase genes in functional microbial communities in response to carbon catabolite repression.

Xinyue Zhang, Xiehui Chen, Shanshan Li, Ayodeji Bello, Jiawen Liu, Liyuan Gao, Zhihua Fan, Shouzhi Wang, Libo Liu, Bo Ma and 1 more

Open access · goldAbstract read
In one paragraph

Article in Biotechnology for biofuels and bioproducts, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.1field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Xinyue Zhang *College of Resources and Environmental Sciences, Northeast Agricultural University, Harbin, 150030, China.
Xiehui Chen *College of Resources and Environmental Sciences, Northeast Agricultural University, Harbin, 150030, China.
Shanshan LiCollege of Resources and Environmental Sciences, Northeast Agricultural University, Harbin, 150030, China.
Ayodeji BelloCollege of Resources and Environmental Sciences, Northeast Agricultural University, Harbin, 150030, China.
Jiawen LiuCollege of Resources and Environmental Sciences, Northeast Agricultural University, Harbin, 150030, China.
Liyuan GaoCollege of Resources and Environmental Sciences, Northeast Agricultural University, Harbin, 150030, China.
Zhihua FanCollege of Resources and Environmental Sciences, Northeast Agricultural University, Harbin, 150030, China.
Shouzhi WangCollege of Animal Science and Technology, Northeast Agricultural University, Harbin, 150030, China.
Libo LiuCollege of Food Science, Northeast Agricultural University, Harbin, 150030, China.
Bo MaSchool of Animal Medicine, Northeast Agricultural University, Harbin, 150030, China. mabo99@neau.edu.cn.
Hongtao LiCollege of Resources and Environmental Sciences, Northeast Agricultural University, Harbin, 150030, China. HTL@neau.edu.cn.
Northeast Agricultural University · CN

Funding

the National Natural Science Foundation of China 31300428the National Natural Science Foundation of China 31870113the provincial Science Foundation of Heilongjiang C2015005
6 · The paper itself

Abstract

backgroundβ-Glucosidase is the rate-limiting enzyme of cellulose degradation. It has been stipulated and established that β-glucosidase-producing microbial communities differentially regulate the expression of glucose/non-glucose tolerant β-glucosidase genes. However, it is still unknown if this differential expression of functional microbial community happens accidentally or as a general regulatory mechanism, and of what biological significance it has. To investigate the composition and function of microbial communities and how they respond to different carbon metabolism pressures and the transcriptional regulation of functional genes, the different carbon metabolism pressure was constructed by setting up the static chamber during composting.

resultsThe composition and function of functional microbial communities demonstrated different behaviors under the carbon metabolism pressure. Functional microbial community up-regulated glucose tolerant β-glucosidase genes expression to maintain the carbon metabolism rate by enhancing the transglycosylation activity of β-glucosidase to compensate for the decrease of hydrolysis activity under carbon catabolite repression (CCR). Micrococcales play a vital role in the resistance of functional microbial community under CCR. The transcription regulation of GH1 family β-glucosidase genes from Proteobacteria showed more obvious inhibition than other phyla under CCR.

conclusionMicrobial functional communities differentially regulate the expression of glucose/non-glucose tolerant β-glucosidase genes under CCR, which is a general regulatory mechanism, not accidental. Furthermore, the differentially expressed β-glucosidase gene exhibited species characteristics at the phylogenetic level.

Indexed as

Carbon catabolite repression (CCR)CompostDifferential expressionFunctional microbial communityβ-Glucosidase

Identifiers

PMID35418139
PMCPMC8756671
OpenAlexW4206456473

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LicenceCC BY
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.