Evidence map›Paper›PMID 35417530›Full record

ArticleClinical cancer research : an official journal of the American Association for Cancer Research2022

Induction of Synthetic Lethality by Activation of Mitochondrial ClpP and Inhibition of HDAC1/2 in Glioblastoma.

Trang T T Nguyen, Enyuan Shang, Salveena Schiffgens, Consuelo Torrini, Chang Shu, Hasan Orhan Akman, Varun V Prabhu, Joshua E Allen, Mike-Andrew Westhoff, Georg Karpel-Massler and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Clinical cancer research : an official journal of the American Association for Cancer Research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 29 citations in OpenAlex.

  1. Review
  2. The histone deacetylase family in health and disease.Signal transduction and targeted therapy · 2026
    Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Mitochondrial Protease ClpP: Cancer Marker and Drug Target.Pharmaceuticals (Basel, Switzerland) · 2025
    Review
  9. Review
  10. Review
  11. Review
  12. Review
  13. Review
  14. Article
  15. Article
  16. Review
  17. Review
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Trang T T NguyenDepartment of Pathology and Cell Biology, Columbia University Medical Center, New York, New York.ORCID 0000-0001-8747-9082
Enyuan ShangDepartment of Biological Sciences, Bronx Community College, City University of New York, Bronx, New York.ORCID 0000-0001-5299-2636
Salveena SchiffgensDepartment of Pathology and Cell Biology, Columbia University Medical Center, New York, New York.ORCID 0000-0002-4949-6479
Consuelo TorriniDepartment of Pathology and Cell Biology, Columbia University Medical Center, New York, New York.ORCID 0000-0003-2743-0839
Chang ShuDepartment of Pathology and Cell Biology, Columbia University Medical Center, New York, New York.
Hasan Orhan AkmanDepartment of Neurology, Columbia University Medical Center, New York, New York.
Varun V PrabhuChimerix, Inc., Durham, North Carolina.
Joshua E AllenChimerix, Inc., Durham, North Carolina.
Mike-Andrew WesthoffDepartment of Pediatrics and Adolescent Medicine, Ulm University Medical Center, Ulm, Germany.ORCID 0000-0003-3256-7100
Georg Karpel-MasslerDepartment of Neurosurgery, Ulm University Medical Center, Ulm, Germany.ORCID 0000-0001-8236-5369
Markus D SiegelinDepartment of Pathology and Cell Biology, Columbia University Medical Center, New York, New York.ORCID 0000-0001-7113-3634
Columbia University Irving Medical Center · USArgos Therapeutics (United States) · USUniversität Ulm · DEBronx Community College · US

Funding

Tumor Biology and Microenvironment ProgramP30CA013696 · NCI · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI Parisa Tehranifar · 1985 to 2026
$115.3M
Project-005UL1TR001430 · NCATS · BOSTON UNIVERSITY MEDICAL CAMPUS · PI BAIR-MERRITT, MEGAN H, CENTER, DAVID M. · 2015 to 2024
$52.3M
HDAC Inhibitors Reverse the Warburg Effect and Elicit Metabolic Vulnerabilities in Model Systems of GlioblastomaR01NS113793 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI SIEGELIN, MARKUS D · 2021 to 2025
$2.0M
Targeting Mutant IDH1 for a Novel Synthetic Lethal Interaction in Malignant GliomasR01NS102366 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI SIEGELIN, MARKUS D · 2018 to 2022
$1.8M
Dual Inhibition of Mitochondrial Matrix Chaperones and Anti-Apoptotic Bcl-2 Family Members for Glioblastoma Therapy.R01NS095848 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI SIEGELIN, MARKUS D · 2016 to 2020
$1.8M
Becton Dickinson LSR II Analytical Flow CytometerS10RR027050 · NCRR · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI CLYNES, RAPHAEL A. · 2011 to 2011
$413k
NCATS NIH HHS UL1 TR001430NCI NIH HHS P30 CA013696NCRR NIH HHS S10 RR027050NINDS NIH HHS R01 NS095848NINDS NIH HHS R01 NS102366NINDS NIH HHS R01 NS113793
6 · The paper itself

Abstract

purposeNovel therapeutic targets are critical to unravel for the most common primary brain tumor in adults, glioblastoma (GBM). We have identified a novel synthetic lethal interaction between ClpP activation and HDAC1/2 inhibition that converges on GBM energy metabolism. EXPERIMENTAL

designTranscriptome, metabolite, and U-13C-glucose tracing analyses were utilized in patient-derived xenograft (PDX) models of GBM. Orthotopic GBM models were used for in vivo studies.

resultsWe showed that activation of the mitochondrial ClpP protease by mutant ClpP (Y118A) or through utilization of second-generation imipridone compounds (ONC206 and ONC212) in combination with genetic interference of HDAC1 and HDAC2 as well as with global (panobinostat) or selective (romidepsin) HDAC inhibitors caused synergistic reduction of viability in GBM model systems, which was mediated by interference with tricarboxylic acid cycle activity and GBM cell respiration. This effect was partially mediated by activation of apoptosis along with activation of caspases regulated chiefly by Bcl-xL and Mcl-1. Knockdown of the ClpP protease or ectopic expression of a ClpP D190A mutant substantially rescued from the inhibition of oxidative energy metabolism as well as from the reduction of cellular viability by ClpP activators and the combination treatment, respectively. Finally, utilizing GBM PDX models, we demonstrated that the combination treatment of HDAC inhibitors and imipridones prolonged host survival more potently than single treatments or vehicle in vivo.

conclusionsCollectively, these observations suggest that the efficacy of HDAC inhibitors might be significantly enhanced through ClpP activators in model systems of human GBM.

Indexed as

GlioblastomaApoptosisBenzyl CompoundsCell Line, TumorCell ProliferationEndopeptidase ClpHeterocyclic Compounds, 3-RingHistone Deacetylase 1Histone Deacetylase InhibitorsHumansPeptide HydrolasesSynthetic Lethal MutationsXenograft Model Antitumor AssaysBenzyl CompoundsClpP protein, humanEndopeptidase ClpHDAC1 protein, humanHeterocyclic Compounds, 3-RingHistone Deacetylase 1Histone Deacetylase InhibitorsONC206ONC212Peptide Hydrolases

Identifiers

PMID35417530
PMCPMC9118753
OpenAlexW4224047342

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.