Evidence map›Paper›PMID 35416776›Full record

ArticleGenetics in medicine : official journal of the American College of Medical Genetics2022

Real world outcomes and implementation pathways of exome sequencing in an adult genetic department.

Maie Walsh, Kirsty West, Jessica A Taylor, Bryony A Thompson, Adelaide Hopkins, Adrienne Sexton, Abiramy Ragunathan, Kunal P Verma, Julie Panetta, Ebony Matotek and 5 more

Abstract read
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In one paragraph

Article in Genetics in medicine : official journal of the American College of Medical Genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors at 1 institution in 1 country.

Maie WalshGenomic Medicine, The Royal Melbourne Hospital, Parkville, Victoria, Australia; Department of Medicine at Royal Melbourne Hospital, Melbourne Medical School, The University of Melbourne, Parkville, Victoria, Australia. Electronic address: maie.walsh@mh.org.au.
Kirsty WestGenomic Medicine, The Royal Melbourne Hospital, Parkville, Victoria, Australia.
Jessica A TaylorGenomic Medicine, The Royal Melbourne Hospital, Parkville, Victoria, Australia.
Bryony A ThompsonDepartment of Pathology, The Royal Melbourne Hospital, Parkville, Victoria, Australia; Department of Clinical Pathology, Melbourne Medical School, The University of Melbourne, Parkville, Victoria, Australia.
Adelaide HopkinsGenomic Medicine, The Royal Melbourne Hospital, Parkville, Victoria, Australia.
Adrienne SextonGenomic Medicine, The Royal Melbourne Hospital, Parkville, Victoria, Australia; Department of Medicine at Royal Melbourne Hospital, Melbourne Medical School, The University of Melbourne, Parkville, Victoria, Australia.
Abiramy RagunathanGenomic Medicine, The Royal Melbourne Hospital, Parkville, Victoria, Australia.
Kunal P VermaGenomic Medicine, The Royal Melbourne Hospital, Parkville, Victoria, Australia.
Julie PanettaMetabolic Diseases Unit (MDU), The Royal Melbourne Hospital, Parkville, Victoria, Australia.
Ebony MatotekGenomic Medicine, The Royal Melbourne Hospital, Parkville, Victoria, Australia.
Michael C FaheyGenomic Medicine, The Royal Melbourne Hospital, Parkville, Victoria, Australia.
Michael ChristieDepartment of Medicine at Royal Melbourne Hospital, Melbourne Medical School, The University of Melbourne, Parkville, Victoria, Australia; Department of Pathology, The Royal Melbourne Hospital, Parkville, Victoria, Australia.
Ingrid M WinshipGenomic Medicine, The Royal Melbourne Hospital, Parkville, Victoria, Australia; Department of Medicine at Royal Melbourne Hospital, Melbourne Medical School, The University of Melbourne, Parkville, Victoria, Australia.
Alison H TrainerGenomic Medicine, The Royal Melbourne Hospital, Parkville, Victoria, Australia; Department of Medicine at Royal Melbourne Hospital, Melbourne Medical School, The University of Melbourne, Parkville, Victoria, Australia.
Paul A JamesGenomic Medicine, The Royal Melbourne Hospital, Parkville, Victoria, Australia; Department of Medicine at Royal Melbourne Hospital, Melbourne Medical School, The University of Melbourne, Parkville, Victoria, Australia.
The Royal Melbourne Hospital · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeThis study aimed to correlate the indications and diagnostic yield of exome sequencing (ES) in adult patients across various clinical settings. The secondary aim was to examine the clinical utility of ES in adult patients.

methodsData on demographics, clinical indications, results, management changes, and cascade testing were collected for 250 consecutive patients who underwent ES through an adult genetics department between 2016 and 2021. Data were analyzed using descriptive and inferential statistics. Testing in which traditional gene panels were in standard use, such as in heritable cancers, was excluded.

resultsThe average age at testing was 43 years (range = 17-80 years). A molecular diagnosis was identified in 29% of patients. Older age at symptom onset did not pre-exclude a substantial diagnostic yield. Patients with syndromic intellectual disability and multiple system disorders had the highest yield. In >50% of patients with an exome diagnosis, the results changed management. Cascade testing occured in at least one family member for 30% of patients with a diagnosis. Diagnostic results had reproductive implications for 26% of patients and 31% of patients' relatives.

conclusionES has a robust diagnostic yield and clear clinical utility in adult patients across a range of ages and phenotypes.

Indexed as

ExomeIntellectual DisabilityAdultExome SequencingGenetic TestingHumansPhenotypeAdult patientsClinical utilityExome sequencing

Identifiers

PMID35416776
OpenAlexW4223450175

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.