Evidence map›Paper›PMID 35416650›Full record

ArticleJournal of the American Chemical Society2022

Exploiting Endogenous Enzymes for Cancer-Cell Selective Metabolic Labeling of RNA in Vivo.

Samantha Beasley, Abigail Vandewalle, Monika Singha, Kim Nguyen, Whitney England, Eric Tarapore, Nan Dai, Ivan R Corrêa, Scott X Atwood, Robert C Spitale

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Dual-Action-Only PROTACs.Journal of the American Chemical Society · 2025
    Article
  2. Article
  3. Review
  4. Article
  5. Molecular Engineering of Self-Immolative Bioresponsive MR Probes.Journal of the American Chemical Society · 2023
    Article
  6. Article
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Samantha BeasleyDepartment of Pharmaceutical Sciences, University of California─Irvine, Irvine, California 92697, United States.
Abigail VandewalleDepartment of Pharmaceutical Sciences, University of California─Irvine, Irvine, California 92697, United States.
Monika SinghaDepartment of Pharmaceutical Sciences, University of California─Irvine, Irvine, California 92697, United States.
Kim NguyenDepartment of Pharmaceutical Sciences, University of California─Irvine, Irvine, California 92697, United States.ORCID 0000-0002-6599-2851
Whitney EnglandDepartment of Pharmaceutical Sciences, University of California─Irvine, Irvine, California 92697, United States.
Eric TaraporeDepartment of Developmental & Cellular Biology, University of California─Irvine, Irvine, California 92697, United States.
Nan DaiNew England Biolabs, 240 County Road, Ipswich, Massachusetts 01938, United States.
Ivan R CorrêaNew England Biolabs, 240 County Road, Ipswich, Massachusetts 01938, United States.ORCID 0000-0002-3169-6878
Scott X AtwoodDepartment of Developmental & Cellular Biology, University of California─Irvine, Irvine, California 92697, United States.
Robert C SpitaleDepartment of Pharmaceutical Sciences, University of California─Irvine, Irvine, California 92697, United States.ORCID 0000-0002-3511-8098

Funding

Univ.of Calif., Irvine Cancer Center Support GrantP30CA062203 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI Melanie Funes · 1994 to 2026
$57.9M
CARCINOGENESIST32CA009054 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI EDINGER, AIMEE L, FRUMAN, DAVID ALEXANDER · 1985 to 2025
$8.6M
Phosphorylation-dependent regulation of GLI transcription factorsR01CA237563 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI ATWOOD, SCOTT · 2019 to 2023
$1.7M
NCI NIH HHS P30 CA062203NCI NIH HHS R01 CA237563NCI NIH HHS T32 CA009054
6 · The paper itself

Abstract

Tissues and organs are composed of many diverse cell types, making cell-specific gene expression profiling a major challenge. Herein we report that endogenous enzymes, unique to a cell of interest, can be utilized to enable cell-specific metabolic labeling of RNA. We demonstrate that appropriately designed "caged" nucleosides can be rendered active by serving as a substrate for cancer-cell specific enzymes to enable RNA metabolic labeling, only in cancer cells. We envision that the ease and high stringency of our approach will enable expression analysis of tumor cells in complex environments.

Indexed as

NeoplasmsRNANucleosidesNucleosidesRNA

Identifiers

PMID35416650
PMCPMC10032647

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.