Evidence map›Paper›PMID 35416532›Full record

ArticleNeurogenetics2022

Clinical, genetic profile and disease progression of sarcoglycanopathies in a large cohort from India: high prevalence of SGCB c.544A > C.

Mainak Bardhan, Ram Murthy Anjanappa, Kiran Polavarapu, Veeramani Preethish-Kumar, Seena Vengalil, Saraswati Nashi, Shamita Sanga, Hansashree Padmanabh, Ravi Kiran Valasani, Vikas Nishadham and 7 more

Abstract read
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In one paragraph

Article in Neurogenetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.4field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 4 institutions in 1 country.

Mainak BardhanDepartment of Neurology, Neuroscience Faculty Center, National Institute of Mental Health And Neurosciences (NIMHANS), Karnataka, 560029, Bengaluru, India.
Ram Murthy AnjanappaDepartment of Neurology, Neuroscience Faculty Center, National Institute of Mental Health And Neurosciences (NIMHANS), Karnataka, 560029, Bengaluru, India.
Kiran PolavarapuDepartment of Neurology, Neuroscience Faculty Center, National Institute of Mental Health And Neurosciences (NIMHANS), Karnataka, 560029, Bengaluru, India.
Veeramani Preethish-KumarDepartment of Neurology, Neuroscience Faculty Center, National Institute of Mental Health And Neurosciences (NIMHANS), Karnataka, 560029, Bengaluru, India.
Seena VengalilDepartment of Neurology, Neuroscience Faculty Center, National Institute of Mental Health And Neurosciences (NIMHANS), Karnataka, 560029, Bengaluru, India.
Saraswati NashiDepartment of Neurology, Neuroscience Faculty Center, National Institute of Mental Health And Neurosciences (NIMHANS), Karnataka, 560029, Bengaluru, India.
Shamita SangaNational Institute of Biomedical Genomics, Kalyani, India.
Hansashree PadmanabhDepartment of Neurology, Neuroscience Faculty Center, National Institute of Mental Health And Neurosciences (NIMHANS), Karnataka, 560029, Bengaluru, India.
Ravi Kiran ValasaniDepartment of Neurology, Neuroscience Faculty Center, National Institute of Mental Health And Neurosciences (NIMHANS), Karnataka, 560029, Bengaluru, India.
Vikas NishadhamDepartment of Neurology, Neuroscience Faculty Center, National Institute of Mental Health And Neurosciences (NIMHANS), Karnataka, 560029, Bengaluru, India.
Muddasu KeerthipriyaDepartment of Neurology, Neuroscience Faculty Center, National Institute of Mental Health And Neurosciences (NIMHANS), Karnataka, 560029, Bengaluru, India.
Thenral S GeethaMedgenome, MedgenomeLabs, Bommasandra, Bangalore, India.
Vedam RamprasadMedgenome, MedgenomeLabs, Bommasandra, Bangalore, India.
Gautham ArunachalDepartment of Human Genetics, National Institute of Mental Health And Neurosciences (NIMHANS), Karnataka, 560029, Bengaluru, India.
Priya Treesa ThomasDepartment of Psychiatric Social Work, National Institute of Mental Health And Neurosciences (NIMHANS), Karnataka, 560029, Bengaluru, India.
Moulinath AcharyaNational Institute of Biomedical Genomics, Kalyani, India.
Atchayaram NaliniDepartment of Neurology, Neuroscience Faculty Center, National Institute of Mental Health And Neurosciences (NIMHANS), Karnataka, 560029, Bengaluru, India. atchayaramnalini@yahoo.co.in.ORCID 0000-0001-9791-3639
National Institute of Mental Health and Neurosciences · INNational Institute of Biomedical Genomics · INSciGenom Labs (India) · INNational Institute of Cholera and Enteric Diseases · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The clinico-genetic architecture of sarcoglycanopathies in Indian patients is reported only as short series. In the present study, we aimed to investigate the clinical picture, genetic basis, and disease progression of patients genetically confirmed to have sarcoglycanopathy. Next-generation sequencing was performed in 68 probands with suspected sarcoglycanopathy. A total of 35 different variants were detected in the sarcoglycan genes in 68 probands (M = 37; age range, 5-50 years). Consanguinity was present in 44 families. Thirty-two variants are predicted to be pathogenic/likely pathogenic, among which 25 (78.13%) are reported, and 7 (21.87%) are novel. The clinical diagnosis was confirmed in a total of 64 (94.12%) probands with biallelic variations [SGCA(n=18); SGCB(n=34); SGCG(n=7); SGCD(n=5)]. The most common mutation was c.544A > C (p.Thr182Pro) in SGCB, and detected in 20 patients (29.42%). The majority of pathogenic mutations are homozygous (n = 30; 93.75%). Variants in 4 cases are of uncertain significance. Thirty-three patients lost ambulation at a mean age of 15.12 ± 9.47 years, after 7.76 ± 5.95 years into the illness. Only 2 patients had cardiac symptoms, and one had respiratory muscle involvement. The results from this study suggest that mutations in SGCB are most common, followed by SGCA, SGCG, and SGCD. The novel variations identified in this study expand the mutational spectrum of sarcoglycanopathies. To the best of our knowledge, this is the first study from India to describe a large cohort of genetically confirmed patients with sarcoglycanopathy and report its disease progression.

Indexed as

SarcoglycanopathiesSarcoglycansAdolescentAdultChildChild, PreschoolDisease ProgressionGenetic ProfileHumansMiddle AgedPrevalenceYoung AdultSarcoglycansSGCB protein, humanLGMDR3LGMDR4LGMDR5LGMDR6Muscular dystrophySarcoglycanopathy

Identifiers

PMID35416532
OpenAlexW4223529840

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.