Evidence map›Paper›PMID 35414216›Full record

ArticleJournal of the Royal Society, Interface2022

Multi-scale mechanistic modelling of the host defence in invasive aspergillosis reveals leucocyte activation and iron acquisition as drivers of infection outcome.

Henrique Al Ribeiro, Luis Sordo Vieira, Yogesh Scindia, Bandita Adhikari, Matthew Wheeler, Adam Knapp, William Schroeder, Borna Mehrad, Reinhard Laubenbacher

Open access · greenAbstract read
In one paragraph

Article in Journal of the Royal Society, Interface, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.9field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 21 citations in OpenAlex.

  1. Personalizing computational models to construct medical digital twins.Journal of the Royal Society, Interface · 2025
    Article
  2. Article
  3. Control of medical digital twins with artificial neural networks.Philosophical transactions. Series A, Mathematical, physical, and engineering sciences · 2025
    Article
  4. Article
  5. Article
  6. Personalizing computational models to construct medical digital twins.bioRxiv : the preprint server for biology · 2024
    Article
  7. Article
  8. Article
  9. Article
  10. Digital twins in medicine.Nature computational science · 2024
    Review
  11. Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Henrique Al RibeiroDivision of Pulmonary, Critical Care, and Sleep Medicine, Department of Medicine, University of Florida, Gainesville, FL, USA.
Luis Sordo VieiraDivision of Pulmonary, Critical Care, and Sleep Medicine, Department of Medicine, University of Florida, Gainesville, FL, USA.
Yogesh ScindiaDivision of Pulmonary, Critical Care, and Sleep Medicine, Department of Medicine, University of Florida, Gainesville, FL, USA.
Bandita AdhikariCenter for Quantitative Medicine, School of Medicine, University of Connecticut, Farmington, CT, USA.
Matthew WheelerDivision of Pulmonary, Critical Care, and Sleep Medicine, Department of Medicine, University of Florida, Gainesville, FL, USA.
Adam KnappDivision of Pulmonary, Critical Care, and Sleep Medicine, Department of Medicine, University of Florida, Gainesville, FL, USA.
William SchroederKitware Inc., Clifton Park, NY, USA.
Borna MehradDivision of Pulmonary, Critical Care, and Sleep Medicine, Department of Medicine, University of Florida, Gainesville, FL, USA.
Reinhard LaubenbacherDivision of Pulmonary, Critical Care, and Sleep Medicine, Department of Medicine, University of Florida, Gainesville, FL, USA.ORCID 0000-0002-9143-9451
University of Florida · USKitware (United States) · USUniversity of Connecticut · US

Funding

Multiscale modeling of the role of heme during invasive pulmonary aspergillosisR01AI135128 · NIAID · UNIVERSITY OF FLORIDA · PI REINHARD LAUBENBACHER, Borna Mehrad · 2018 to 2026
$4.9M
Skeletal, Craniofacial and Oral Biology Training GrantT90DE021989 · NIDCR · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI MINA, MINA · 2011 to 2022
$4.5M
Modular design of multiscale models, with an application to the innate immune response to fungal respiratory pathogens.U01EB024501 · NIBIB · UNIVERSITY OF FLORIDA · PI LAUBENBACHER, REINHARD, MEHRAD, BORNA · 2017 to 2020
$2.9M
Control of heterogeneous microbial communities using model-based multi-objective optimizationR01GM127909 · NIGMS · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI DONGARI-BAGTZOGLOU, ANNA I, LAUBENBACHER, REINHARD · 2018 to 2021
$1.8M
NIAID NIH HHS R01 AI135128NIBIB NIH HHS U01 EB024501NIDCR NIH HHS T90 DE021989NIGMS NIH HHS R01 GM127909
6 · The paper itself

Abstract

Aspergillus species are ubiquitous environmental moulds, with spores inhaled daily by most humans. Immunocompromised hosts can develop an invasive infection resulting in high mortality. There is, therefore, a pressing need for host-centric therapeutics for this infection. To address it, we created a multi-scale computational model of the infection, focused on its interaction with the innate immune system and iron, a critical nutrient for the pathogen. The model, parameterized using published data, was found to recapitulate a wide range of biological features and was experimentally validated

Indexed as

AspergillosisAspergillus fumigatusHumansIronSiderophoresSpores, FungalIronSiderophoresAspergillus fumigatuscomputational modelinnate immune responseiron homeostasis

Identifiers

PMID35414216
PMCPMC9006013
OpenAlexW4223626367

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.