Evidence map›Paper›PMID 35414146›Full record

ArticleScientific data2022

A multi-million image Serial Femtosecond Crystallography dataset collected at the European XFEL.

Henry J Kirkwood, Raphael de Wijn, Grant Mills, Romain Letrun, Marco Kloos, Mohammad Vakili, Mikhail Karnevskiy, Karim Ahmed, Richard J Bean, Johan Bielecki and 10 more

Abstract read
In one paragraph

Article in Scientific data, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Review
  2. Article
  3. XFEL Microcrystallography of Self-Assembling SilverJournal of the American Chemical Society · 2023
    Article
  4. Autocorrelation analysis for cryo-EM with sparsity constraints: Improved sample complexity and projection-based algorithms.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  5. Protein dynamics: The future is bright and complicated!Structural dynamics (Melville, N.Y.) · 2023
    Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors.

Henry J Kirkwood *European XFEL, Holzkoppel 4, 22869, Schenefeld, Germany. henry.kirkwood@xfel.eu.ORCID 0000-0001-6792-3844
Raphael de Wijn *European XFEL, Holzkoppel 4, 22869, Schenefeld, Germany.ORCID 0000-0002-8342-1008
Grant Mills *European XFEL, Holzkoppel 4, 22869, Schenefeld, Germany.
Romain LetrunEuropean XFEL, Holzkoppel 4, 22869, Schenefeld, Germany.ORCID 0000-0002-0569-5193
Marco KloosEuropean XFEL, Holzkoppel 4, 22869, Schenefeld, Germany.
Mohammad VakiliEuropean XFEL, Holzkoppel 4, 22869, Schenefeld, Germany.ORCID 0000-0001-9776-0177
Mikhail KarnevskiyEuropean XFEL, Holzkoppel 4, 22869, Schenefeld, Germany.
Karim AhmedEuropean XFEL, Holzkoppel 4, 22869, Schenefeld, Germany.
Richard J BeanEuropean XFEL, Holzkoppel 4, 22869, Schenefeld, Germany.
Johan BieleckiEuropean XFEL, Holzkoppel 4, 22869, Schenefeld, Germany.
Fabio Dall'AntoniaEuropean XFEL, Holzkoppel 4, 22869, Schenefeld, Germany.
Yoonhee KimEuropean XFEL, Holzkoppel 4, 22869, Schenefeld, Germany.
Chan KimEuropean XFEL, Holzkoppel 4, 22869, Schenefeld, Germany.ORCID 0000-0003-4559-7982
Jayanath KoliyaduEuropean XFEL, Holzkoppel 4, 22869, Schenefeld, Germany.
Adam RoundEuropean XFEL, Holzkoppel 4, 22869, Schenefeld, Germany.
Tokushi SatoEuropean XFEL, Holzkoppel 4, 22869, Schenefeld, Germany.ORCID 0000-0003-3155-3487
Marcin SikorskiEuropean XFEL, Holzkoppel 4, 22869, Schenefeld, Germany.
Patrik VagovičEuropean XFEL, Holzkoppel 4, 22869, Schenefeld, Germany.
Jolanta Sztuk-DambietzEuropean XFEL, Holzkoppel 4, 22869, Schenefeld, Germany.
Adrian P MancusoEuropean XFEL, Holzkoppel 4, 22869, Schenefeld, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Serial femtosecond crystallography is a rapidly developing method for determining the structure of biomolecules for samples which have proven challenging with conventional X-ray crystallography, such as for membrane proteins and microcrystals, or for time-resolved studies. The European XFEL, the first high repetition rate hard X-ray free electron laser, provides the ability to record diffraction data at more than an order of magnitude faster than previously achievable, putting increased demand on sample delivery and data processing. This work describes a publicly available serial femtosecond crystallography dataset collected at the SPB/SFX instrument at the European XFEL. This dataset contains information suitable for algorithmic development for detector calibration, image classification and structure determination, as well as testing and training for future users of the European XFEL and other XFELs.

Identifiers

PMID35414146
PMCPMC9005607

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.