Evidence map›Paper›PMID 35413718›Full record

ArticleMedical principles and practice : international journal of the Kuwait University, Health Science Centre2022

Simultaneous Detection of Mycobacterium tuberculosis and Atypical Mycobacteria by DNA-Microarray in Egypt.

Ahmed Gaballah, Abeer Ghazal, Reda Almiry, Rasha Emad, Nadia Sadek, Mohamed Abdel Rahman, Eglal El-Sherbini

Open access · diamondAbstract read
In one paragraph

Article in Medical principles and practice : international journal of the Kuwait University, Health Science Centre, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed, 1 pooled it
0.5field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 1 synthesis or guideline pooled it, 3 citations in OpenAlex.

  1. Prevalence ofFrontiers in microbiology · 2024
    Pooled it
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  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Ahmed GaballahMicrobiology Department, Medical Research Institute, Alexandria University, Alexandria, Egypt.
Abeer GhazalMicrobiology Department, Medical Research Institute, Alexandria University, Alexandria, Egypt.
Reda AlmiryClinical Pathology Department, Military Academy of Medicine, Alexandria Armed Forces Hospital, Alexandria, Egypt.
Rasha EmadClinical Pharmacy, Alexandria Main University Hospital, Alexandria University, Alexandria, Egypt.
Nadia SadekHematology Department, Medical Research Institute, Alexandria University, Alexandria, Egypt.
Mohamed Abdel RahmanClinical Pathology Department, Military Academy of Medicine, Alexandria Armed Forces Hospital, Alexandria, Egypt.
Eglal El-SherbiniMicrobiology Department, Medical Research Institute, Alexandria University, Alexandria, Egypt.
Alexandria University · EGMilitary Medical Academy · EG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND AND

objectivesImmunocompromised patients are a high-risk group for developing mycobacterial infections with either pulmonary and/or extrapulmonary diseases. Low-cost/density DNA-microarray is considered an easy and efficient method for the detection of typical and atypical mycobacterial species. MATERIALS AND

methodsThirty immunocompromised patients were recruited to provide their clinical specimens (sputum, serum, urine, and lymph node aspirates). Real-time polymerase chain reaction (PCR) and DNA-microarray techniques were performed and compared to the conventional methods of Ziehl-Neelsen staining and Lowenstein Jensen culturing.

resultsMycobacterium tuberculosis complex was detected in all 30 clinical specimens (100% sensitivity) by real-time PCR and DNA-microarray. Additionally, coinfection with 4 atypical species belonging to nontuberculous mycobacteria was identified in 7 sputum specimens. These atypical mycobacterial species were identified as M. kansasii 10% (n = 3), M. avium complex 6.6% (n = 2), M. gordanae 3.3% (n = 1), and M. peregrinum 3.3% (n = 1).

conclusionThis study documents the presence of certain species of atypical mycobacteria among immunocompromised patients in Egypt.

Indexed as

Mycobacterium tuberculosisTuberculosisDNAEgyptHumansNontuberculous MycobacteriaSputumDNAAtypical mycobacteriaDNA-microarrayImmunocompromised patientsMycobacterium tuberculosis complexNontuberculous mycobacteria

Identifiers

PMID35413718
PMCPMC9274830
OpenAlexW4223510925

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.