Evidence map›Paper›PMID 35413123›Full record

ArticleMolecular biology and evolution2022

Venom Gene Sequence Diversity and Expression Jointly Shape Diet Adaptation in Pitvipers.

Andrew J Mason, Matthew L Holding, Rhett M Rautsaw, Darin R Rokyta, Christopher L Parkinson, H Lisle Gibbs

Open access · goldAbstract read
In one paragraph

Article in Molecular biology and evolution, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Article
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  4. Review
  5. Proteomic profiling and comparative hemotoxicity ofThe journal of venomous animals and toxins including tropical diseases · 2026
    Article
  6. Article
  7. Duplication of a conserved mitochondrial enzyme gene arms parasitoid wasps with venom cytotoxicity and oogenesis regulation.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  8. Article
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  12. Article
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  15. The genetic regulatory architecture and epigenomic basis for age-related changes in rattlesnake venom.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  16. Functional genomic diversity is correlated with neutral genomic diversity in populations of an endangered rattlesnake.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  17. Article
  18. Article
  19. Article
  20. A novel broad spectrum venom metalloproteinase autoinhibitor in the rattlesnakeProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

Andrew J MasonDepartment of Evolution, Ecology, and Organismal Biology, The Ohio State University, Columbus, OH, USA.ORCID 0000-0003-0297-1313
Matthew L HoldingLife Sciences Institute, University of Michigan, Ann Arbor, MI, USA.ORCID 0000-0003-3477-3012
Rhett M RautsawDepartment of Biological Sciences, Clemson University, Clemson, SC, USA.ORCID 0000-0002-8229-5951
Darin R RokytaDepartment of Biological Science, Florida State University, Tallahassee, FL, USA.ORCID 0000-0002-0356-2178
Christopher L ParkinsonDepartment of Biological Sciences, Clemson University, Clemson, SC, USA.ORCID 0000-0002-2020-6992
H Lisle GibbsDepartment of Evolution, Ecology, and Organismal Biology, The Ohio State University, Columbus, OH, USA.ORCID 0000-0001-7461-3393
Clemson University · USThe Ohio State University · USFlorida State University · USUniversity of Michigan · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Understanding the joint roles of protein sequence variation and differential expression during adaptive evolution is a fundamental, yet largely unrealized goal of evolutionary biology. Here, we use phylogenetic path analysis to analyze a comprehensive venom-gland transcriptome dataset spanning three genera of pitvipers to identify the functional genetic basis of a key adaptation (venom complexity) linked to diet breadth (DB). The analysis of gene-family-specific patterns reveals that, for genes encoding two of the most important venom proteins (snake venom metalloproteases and snake venom serine proteases), there are direct, positive relationships between sequence diversity (SD), expression diversity (ED), and increased DB. Further analysis of gene-family diversification for these proteins showed no constraint on how individual lineages achieved toxin gene SD in terms of the patterns of paralog diversification. In contrast, another major venom protein family (PLA2s) showed no relationship between venom molecular diversity and DB. Additional analyses suggest that other molecular mechanisms-such as higher absolute levels of expression-are responsible for diet adaptation involving these venom proteins. Broadly, our findings argue that functional diversity generated through sequence and expression variations jointly determine adaptation in the key components of pitviper venoms, which mediate complex molecular interactions between the snakes and their prey.

Indexed as

SnakesSnake VenomsAdaptation, PhysiologicalAnimalsDietPhylogenySnake Venomsadaptationdiet breadthdiversitygenotype–phenotypevenom

Identifiers

PMID35413123
PMCPMC9040050
OpenAlexW4223438099

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.