Evidence map›Paper›PMID 35412914›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2022

A plant-specific module for homologous recombination repair.

Xuanpeng Wang, Lili Wang, Yongchi Huang, Zhiping Deng, Cunliang Li, Jian Zhang, Mingxi Zheng, Shunping Yan

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Targeting ATR in Cancer Medicine.Cancer treatment and research · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Xuanpeng WangHubei Hongshan Laboratory, Wuhan, 430070, China.ORCID 0000-0001-6110-0468
Lili WangHubei Hongshan Laboratory, Wuhan, 430070, China.
Yongchi HuangHubei Hongshan Laboratory, Wuhan, 430070, China.
Zhiping DengState Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-products, Institute of Virology and Biotechnology, Zhejiang Academy of Agricultural Sciences, Hangzhou, 310021, China.
Cunliang LiHubei Hongshan Laboratory, Wuhan, 430070, China.
Jian ZhangHubei Hongshan Laboratory, Wuhan, 430070, China.
Mingxi ZhengHubei Hongshan Laboratory, Wuhan, 430070, China.
Shunping YanHubei Hongshan Laboratory, Wuhan, 430070, China.ORCID 0000-0002-3665-1310

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Homologous recombination repair (HR) is an error-free DNA damage repair pathway to maintain genome stability and a basis of gene targeting using genome-editing tools. However, the mechanisms of HR in plants are still poorly understood. Through genetic screens for DNA damage response mutants (DDRM) in Arabidopsis, we find that a plant-specific ubiquitin E3 ligase DDRM1 is required for HR. DDRM1 contains an N-terminal BRCT (BRCA1 C-terminal) domain and a C-terminal RING (really interesting new gene) domain and is highly conserved in plants including mosses. The ddrm1 mutant is defective in HR and thus is hypersensitive to DNA-damaging reagents. Biochemical studies reveal that DDRM1 interacts with and ubiquitinates the transcription factor SOG1, a plant-specific master regulator of DNA damage responses. Interestingly, DDRM1-mediated ubiquitination promotes the stability of SOG1. Consistently, genetic data support that SOG1 functions downstream of DDRM1. Our study reveals that DDRM1-SOG1 is a plant-specific module for HR and highlights the importance of ubiquitination in HR.

Indexed as

ArabidopsisArabidopsis ProteinsRecombinational DNA RepairTranscription FactorsUbiquitin-Protein LigasesDNA DamageArabidopsis ProteinsAT1G67180 protein, ArabidopsisSOG1 protein, ArabidopsisTranscription FactorsUbiquitin-Protein LigasesDNA damage responsehomologous recombination repairSOG1ubiquitination

Identifiers

PMID35412914
PMCPMC9169791

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.