Evidence map›Paper›PMID 35412096›Full record

ArticleArchives of microbiology2022

Fungal community diversity of heavy metal contaminated soils revealed by metagenomics.

Michel Rodrigo Zambrano Passarini, Júlia Ronzella Ottoni, Paulo Emílio Dos Santos Costa, Denise Cavalvante Hissa, Raul Maia Falcão, Vânia Maria Maciel Melo, Valdir Queiroz Balbino, Luiz Alberto Ribeiro Mendonça, Maria Gorethe de Sousa Lima, Henrique Douglas Melo Coutinho and 1 more

Abstract read
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In one paragraph

Article in Archives of microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 25 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 1 country.

Michel Rodrigo Zambrano PassariniUNILA-Universidade Federal da Integração Latino-Americana, Av. Tarquínio Joslin Dos Santos, 1000-Jd Universitário, Foz do Iguaçu, PR, 85870-650, Brazil. michel.passarini@unila.edu.br.ORCID http://orcid.org/0000-0002-8614-1896
Júlia Ronzella OttoniUNILA-Universidade Federal da Integração Latino-Americana, Av. Tarquínio Joslin Dos Santos, 1000-Jd Universitário, Foz do Iguaçu, PR, 85870-650, Brazil.
Paulo Emílio Dos Santos CostaDepartment of Biological Chemistry, Regional University of Cariri, Crato, CE, Brazil.
Denise Cavalvante HissaMicrobial Ecology and Biotechnology Lab, Federal University of Ceara, Fortaleza, CE, Brazil.
Raul Maia FalcãoDepartment of Genetics, Federal University of Pernambuco, Recife, Brazil.
Vânia Maria Maciel MeloMicrobial Ecology and Biotechnology Lab, Federal University of Ceara, Fortaleza, CE, Brazil.
Valdir Queiroz BalbinoDepartment of Genetics, Federal University of Pernambuco, Recife, Brazil.
Luiz Alberto Ribeiro MendonçaDepartment of Civil Engineering, Federal University of Cariri-UFCA, Juazeiro do Norte, CE, Brazil.
Maria Gorethe de Sousa LimaDepartment of Civil Engineering, Federal University of Cariri-UFCA, Juazeiro do Norte, CE, Brazil.
Henrique Douglas Melo CoutinhoDepartment of Biological Chemistry, Regional University of Cariri, Crato, CE, Brazil.
Leandro Costa Lima VerdeDepartment of Biological Chemistry, Regional University of Cariri, Crato, CE, Brazil.
Universidade Regional do Cariri · BRUniversidade Federal da Integração Latino-Americana · BRUniversidade Federal de Pernambuco · BRUniversidade Federal do Cariri · BRUniversidade Federal do Ceará · BR

Funding

funcap DCR-0024-01438.01.00/12
6 · The paper itself

Abstract

The inappropriate disposal of toxic compounds generated by industrial activity has been impacting the environment considerably. Microbial communities inhabiting contaminated sites may represent interesting ecological alternatives for the decontamination of environments. The present work aimed to investigate the fungal diversity and its functionality contained in stream sediments with industrial waste contaminated with heavy metals by using metagenomic approach. A total of 12 fungal orders were retrieved from datasets and, at phylum level, Ascomycota was the most abundant, followed by Basidiomycota, Chytridiomycota and Blastocladiomycota. Higher abundance of sequences was encountered within the less contaminated site, while the lower abundance was found in the sample with the higher contamination with lead. Gene sequences related to DNA repair and heavy metals biosorption processes were found in the four samples analyzed. The genera Aspergillus and Chaetomium, and Saccharomycetales order were highly present within all samples, showing their potential to be used for bioremediation studies. The present work demonstrated the importance of using the metagenomic approach to understand the dynamics and the possible metabolic pathways associated with fungal communities related to environmental samples containing heavy metals, as well as evidenced the importance of improving culturomics techniques for isolating strains with potential application in bioremediation processes of environments contaminated with heavy metals.

Indexed as

Metals, HeavyMycobiomeSoil PollutantsBiodegradation, EnvironmentalMetagenomicsSoilSoil MicrobiologyMetals, HeavySoilSoil PollutantsBioremediationHazardous wastesHeavy metal metabolismHeavy metal toleranceOmics techniqueUncultured fungal

Identifiers

PMID35412096
OpenAlexW4226049024

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.