Evidence map›Paper›PMID 35411212›Full record

ArticleThe Canadian journal of infectious diseases & medical microbiology = Journal canadien des maladies infectieuses et de la microbiologie medicale2022

Molecular Evidence of Coinfection with Acute Respiratory Viruses and High Prevalence of SARS-CoV-2 among Patients Presenting Flu-Like Illness in Bukavu City, Democratic Republic of Congo.

Patrick Bisimwa Ntagereka, Rodrigue Ayagirwe Basengere, Tshass Chasinga Baharanyi, Théophile Mitima Kashosi, Jean-Paul Chikwanine Buhendwa, Parvine Basimane Bisimwa, Aline Byabene Kusinza, Yannick Mugumaarhahama, Dieudonne Wasso Shukuru, Simon Baenyi Patrick and 3 more

Open access · goldAbstract read
In one paragraph

Article in The Canadian journal of infectious diseases & medical microbiology = Journal canadien des maladies infectieuses et de la microbiologie medicale, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Patrick Bisimwa NtagerekaMolecular Biology Laboratory, Université Evangélique en Afrique, Bukavu, Congo.ORCID https://orcid.org/0000-0002-4020-2411
Rodrigue Ayagirwe BasengereMolecular Biology Laboratory, Université Evangélique en Afrique, Bukavu, Congo.ORCID https://orcid.org/0000-0002-5019-0653
Tshass Chasinga BaharanyiFaculty of Medicine, Université Evangélique en Afrique, Bukavu, Congo.ORCID https://orcid.org/0000-0003-3805-7523
Théophile Mitima KashosiMolecular Biology Laboratory, Université Evangélique en Afrique, Bukavu, Congo.
Jean-Paul Chikwanine BuhendwaFaculty of Medicine, Université Evangélique en Afrique, Bukavu, Congo.
Parvine Basimane BisimwaFaculty of Medicine, Université Evangélique en Afrique, Bukavu, Congo.ORCID https://orcid.org/0000-0003-3617-7943
Aline Byabene KusinzaFaculty of Medicine, Université Evangélique en Afrique, Bukavu, Congo.ORCID https://orcid.org/0000-0003-2207-1267
Yannick MugumaarhahamaMolecular Biology Laboratory, Université Evangélique en Afrique, Bukavu, Congo.ORCID https://orcid.org/0000-0002-4690-502X
Dieudonne Wasso ShukuruMolecular Biology Laboratory, Université Evangélique en Afrique, Bukavu, Congo.ORCID https://orcid.org/0000-0002-6750-6351
Simon Baenyi PatrickMolecular Biology Laboratory, Université Evangélique en Afrique, Bukavu, Congo.ORCID https://orcid.org/0000-0002-3831-7316
Ronald TonuiInstitute of Basic Sciences, Technology and Innovation, Department of Molecular Biology and Biotechnology, Pan African University, Nairobi, Kenya.
Ahadi Bwihangane BirindwaMolecular Biology Laboratory, Université Evangélique en Afrique, Bukavu, Congo.ORCID https://orcid.org/0000-0003-4891-5528
Denis MukwegeFaculty of Medicine, Université Evangélique en Afrique, Bukavu, Congo.
Université Evangélique en Afrique · CDKinshasa General Hospital · CD

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The coronavirus disease 2019 (COVID-19) is caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), with clinical manifestation cases that are almost similar to those of common respiratory viral infections. This study determined the prevalence of SARS-CoV-2 and other acute respiratory viruses among patients with flu-like symptoms in Bukavu city, Democratic Republic of Congo. We screened 1352 individuals with flu-like illnesses seeking treatment in 10 health facilities. Nasopharyngeal swab specimens were collected to detect SARS-CoV-2 using real-time reverse transcription-polymerase chain reaction (RT-PCR), and 10 common respiratory viruses were detected by multiplex reverse transcription-polymerase chain reaction assay. Overall, 13.9% (188/1352) of patients were confirmed positive for SARS-CoV-2. Influenza A 5.6% (56/1352) and Influenza B 0.9% (12/1352) were the most common respiratory viruses detected. Overall, more than two cases of the other acute respiratory viruses were detected. Frequently observed symptoms associated with SARS-CoV-2 positivity were shivering (47.8%; OR = 1.8; CI: 0.88-1.35), cough (89.6%; OR = 6.5, CI: 2.16-28.2), and myalgia and dizziness (59.7%; OR = 2.7; CI: 1.36-5.85). Moreover, coinfection was observed in 12 (11.5%) specimens. SARS-CoV-2 and influenza A were the most cooccurring infections, accounting for 33.3% of all positive cases. This study demonstrates cases of COVID-19 infections cooccurring with other acute respiratory infections in Bukavu city during the ongoing outbreak of COVID-19. Therefore, testing for respiratory viruses should be performed in all patients with flu-like symptoms for effective surveillance of the transmission patterns in the COVID-19 affected areas for optimal treatment and effective disease management.

Identifiers

PMID35411212
PMCPMC8994514
OpenAlexW4225810664

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.