Evidence map›Paper›PMID 35410461›Full record

Trial reportMicrobiome2022

Gut microbiome signatures linked to HIV-1 reservoir size and viremia control.

Alessandra Borgognone, Marc Noguera-Julian, Bruna Oriol, Laura Noël-Romas, Marta Ruiz-Riol, Yolanda Guillén, Mariona Parera, Maria Casadellà, Clara Duran, Maria C Puertas and 14 more

Open access · goldAbstract readClinical TrialVideo-Audio Media
In one paragraph

Trial report in Microbiome, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
3.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 55 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors at 8 institutions in 4 countries.

Alessandra BorgognoneIrsiCaixa AIDS Research Institute, Hospital Universitari Germans Trias i Pujol, Barcelona, Catalonia, Spain. aborgognone@irsicaixa.es.ORCID 0000-0001-5487-3016
Marc Noguera-JulianIrsiCaixa AIDS Research Institute, Hospital Universitari Germans Trias i Pujol, Barcelona, Catalonia, Spain.
Bruna OriolIrsiCaixa AIDS Research Institute, Hospital Universitari Germans Trias i Pujol, Barcelona, Catalonia, Spain.
Laura Noël-RomasCenter for Global Health and Diseases, Department of Pathology, Case Western Reserve University, Cleveland, OH, USA.
Marta Ruiz-RiolIrsiCaixa AIDS Research Institute, Hospital Universitari Germans Trias i Pujol, Barcelona, Catalonia, Spain.
Yolanda GuillénInstitut Mar d'Investigacions mediques (IMIM), CIBERONC, Barcelona, Catalonia, Spain.
Mariona PareraIrsiCaixa AIDS Research Institute, Hospital Universitari Germans Trias i Pujol, Barcelona, Catalonia, Spain.
Maria CasadellàIrsiCaixa AIDS Research Institute, Hospital Universitari Germans Trias i Pujol, Barcelona, Catalonia, Spain.
Clara DuranIrsiCaixa AIDS Research Institute, Hospital Universitari Germans Trias i Pujol, Barcelona, Catalonia, Spain.
Maria C PuertasIrsiCaixa AIDS Research Institute, Hospital Universitari Germans Trias i Pujol, Barcelona, Catalonia, Spain.
Francesc Català-MollIrsiCaixa AIDS Research Institute, Hospital Universitari Germans Trias i Pujol, Barcelona, Catalonia, Spain.
Marlon De LeonCenter for Global Health and Diseases, Department of Pathology, Case Western Reserve University, Cleveland, OH, USA.
Samantha KnodelCenter for Global Health and Diseases, Department of Pathology, Case Western Reserve University, Cleveland, OH, USA.
Kenzie BirseCenter for Global Health and Diseases, Department of Pathology, Case Western Reserve University, Cleveland, OH, USA.
Christian ManzardoInfectious Diseases Service, Hospital Clinic-Institut d'Investigacions Biomèdiques August Pi i Sunyer (IDIBAPS), University of Barcelona, Barcelona, Catalonia, Spain.
José M MiróCIBERINFEC, Madrid, Spain.
Bonaventura ClotetIrsiCaixa AIDS Research Institute, Hospital Universitari Germans Trias i Pujol, Barcelona, Catalonia, Spain.
Javier Martinez-PicadoIrsiCaixa AIDS Research Institute, Hospital Universitari Germans Trias i Pujol, Barcelona, Catalonia, Spain.
José MoltóCIBERINFEC, Madrid, Spain.
Beatriz MotheIrsiCaixa AIDS Research Institute, Hospital Universitari Germans Trias i Pujol, Barcelona, Catalonia, Spain.
Adam BurgenerCenter for Global Health and Diseases, Department of Pathology, Case Western Reserve University, Cleveland, OH, USA.
Christian BranderIrsiCaixa AIDS Research Institute, Hospital Universitari Germans Trias i Pujol, Barcelona, Catalonia, Spain.
Roger ParedesIrsiCaixa AIDS Research Institute, Hospital Universitari Germans Trias i Pujol, Barcelona, Catalonia, Spain. rparedes@irsicaixa.es.
BCN02 Study Group
Universitat de Vic - Universitat Central de Catalunya · ESIrsiCaixa · ESCentro de Investigación Biomédica en Red · ESCenter for Global Health · USConsorci Institut D'Investigacions Biomediques August Pi I Sunyer · ESUniversitat Autònoma de Barcelona · ESHospital del Mar Research Institute · ESKarolinska University Hospital · SE

Funding

UC Davis Biostatistics CoreP01AI131568 · NIAID · UNIVERSITY OF CALIFORNIA AT DAVIS · PI STEVENSON, MARIO · 2017 to 2021
$7.1M
Targeting novel pathways to enhance gastrointestinal integrity during HIV infectionR01DK112254 · NIDDK · UNIVERSITY OF WASHINGTON · PI BURGENER, ADAM, KLATT, NICHOLE ROSE · 2017 to 2021
$1.8M
CIHR HB3-164066Medical Research Council MR/N023668/1NIAID NIH HHS P01 AI131568NIDDK NIH HHS R01 DK112254
6 · The paper itself

Abstract

backgroundThe potential role of the gut microbiome as a predictor of immune-mediated HIV-1 control in the absence of antiretroviral therapy (ART) is still unknown. In the BCN02 clinical trial, which combined the MVA.HIVconsv immunogen with the latency-reversing agent romidepsin in early-ART treated HIV-1 infected individuals, 23% (3/13) of participants showed sustained low-levels of plasma viremia during 32 weeks of a monitored ART pause (MAP). Here, we present a multi-omics analysis to identify compositional and functional gut microbiome patterns associated with HIV-1 control in the BCN02 trial.

resultsViremic controllers during the MAP (controllers) exhibited higher Bacteroidales/Clostridiales ratio and lower microbial gene richness before vaccination and throughout the study intervention when compared to non-controllers. Longitudinal assessment indicated that the gut microbiome of controllers was enriched in pro-inflammatory bacteria and depleted in butyrate-producing bacteria and methanogenic archaea. Functional profiling also showed that metabolic pathways related to fatty acid and lipid biosynthesis were significantly increased in controllers. Fecal metaproteome analyses confirmed that baseline functional differences were mainly driven by Clostridiales. Participants with high baseline Bacteroidales/Clostridiales ratio had increased pre-existing immune activation-related transcripts. The Bacteroidales/Clostridiales ratio as well as host immune-activation signatures inversely correlated with HIV-1 reservoir size.

conclusionsThe present proof-of-concept study suggests the Bacteroidales/Clostridiales ratio as a novel gut microbiome signature associated with HIV-1 reservoir size and immune-mediated viral control after ART interruption. Video abstract.

Indexed as

Gastrointestinal MicrobiomeHIV-1HIV InfectionsHumansViremiaGut microbiomeHIV-1 post-treatment controlMicrobiome-based predictive biomarkerTherapeutic HIV-1 vaccineViral reservoir size

Identifiers

PMID35410461
PMCPMC9004083
OpenAlexW4226293772

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.