Evidence map›Paper›PMID 35410377›Full record

ArticleNature genetics2022

Single-cell analysis of somatic mutations in human bronchial epithelial cells in relation to aging and smoking.

Zhenqiu Huang, Shixiang Sun, Moonsook Lee, Alexander Y Maslov, Miao Shi, Spencer Waldman, Ava Marsh, Taha Siddiqui, Xiao Dong, Yakov Peter and 5 more

Registry-linked trialOpen access · greenAbstract read
In one paragraph

Article in Nature genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT05854563 (Genetics of Lung Disease), which is not on this map. Cited by 80 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
80citing papers in PubMed, 1 pooled it
11.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT05854563 recruitingnot on this mapstarted 2023, after this paper: background citation

Genetics of Lung Disease (Exhaled Breath DNA Methylation in Lung Carcinogenesis)

TypeobservationalSponsorAlbert Einstein College of MedicineRan2023 to 2027Enrolled2,000ConditionsLung Diseases, Lung Cancer, Lung Diseases, Obstructive, Lung Diseases, InterstitialArmsObservational only, all subjects, measure DNA mutation and proteomic survey.
3 · Its place in the literature

Who cites it

80 citing papers in PubMed, 1 synthesis or guideline pooled it, 121 citations in OpenAlex.

  1. Pooled it
  2. The Hallmarks of Aging: From Molecular Mechanisms to Clinical Translation.International journal of molecular sciences · 2026
    Review
  3. Article
  4. Somatic mutations and genome mosaicism in aging and disease.Experimental & molecular medicine · 2026
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article

20 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 1 institution in 3 countries.

Zhenqiu Huang *Department of Genetics, Albert Einstein College of Medicine, Bronx, NY, USA. zhenqiu.huang@einsteinmed.edu.ORCID http://orcid.org/0000-0001-5882-2726
Shixiang Sun *Department of Genetics, Albert Einstein College of Medicine, Bronx, NY, USA.ORCID http://orcid.org/0000-0001-5499-2963
Moonsook LeeDepartment of Genetics, Albert Einstein College of Medicine, Bronx, NY, USA.
Alexander Y MaslovDepartment of Genetics, Albert Einstein College of Medicine, Bronx, NY, USA.
Miao ShiDepartment of Pulmonary Medicine, Montefiore Medical Center/Albert Einstein College of Medicine, Bronx, NY, USA.
Spencer WaldmanDepartment of Pulmonary Medicine, Montefiore Medical Center/Albert Einstein College of Medicine, Bronx, NY, USA.
Ava MarshDepartment of Pulmonary Medicine, Montefiore Medical Center/Albert Einstein College of Medicine, Bronx, NY, USA.ORCID http://orcid.org/0000-0002-0235-7842
Taha SiddiquiDepartment of Pulmonary Medicine, Montefiore Medical Center/Albert Einstein College of Medicine, Bronx, NY, USA.
Xiao DongDepartment of Genetics, Albert Einstein College of Medicine, Bronx, NY, USA.ORCID http://orcid.org/0000-0001-9987-5760
Yakov PeterDepartment of Biology, Touro College, Queens, NY, USA.
Ali SadoughiDepartment of Pulmonary Medicine, Montefiore Medical Center/Albert Einstein College of Medicine, Bronx, NY, USA.
Chirag ShahDepartment of Pulmonary Medicine, Montefiore Medical Center/Albert Einstein College of Medicine, Bronx, NY, USA.
Kenny YeDepartment of Epidemiology and Population Health, Albert Einstein College of Medicine, Bronx, NY, USA.ORCID http://orcid.org/0000-0002-1466-855X
Simon D SpivackDepartment of Genetics, Albert Einstein College of Medicine, Bronx, NY, USA. simon.spivack@einsteinmed.edu.ORCID http://orcid.org/0000-0002-8338-8906
Jan VijgDepartment of Genetics, Albert Einstein College of Medicine, Bronx, NY, USA. jan.vijg@einsteinmed.edu.ORCID http://orcid.org/0000-0002-8457-9595
Albert Einstein College of Medicine · US

Funding

THE IMPACT OF CELLULAR DEFENSE ON THE ROLE OF Ku80 IN GENOME MAINTENANCE AND LONGP01AG017242 · NIA · UNIVERSITY OF TEXAS HLTH SCI CTR SAN ANT · PI VIJG, JAN · 1999 to 2023
$46.1M
The role of hyaluronan in longevity and cancer resistance of longest-lived rodentP01AG047200 · NIA · UNIVERSITY OF ROCHESTER · PI Andrei Seluanov · 2014 to 2026
$36.9M
Validation and characterization of the identified variants associated with human longevity in mouse modelsU19AG056278 · NIA · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI Zhengdong Zhang · 2017 to 2026
$24.5M
Einstein's Nathan Shock Center of Excellence in Basic Biology of AgingP30AG038072 · NIA · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI HUFFMAN, DEREK MAJOR · 2010 to 2024
$10.8M
Cross-Validation of Genome Integrity Assays in Primary Human CellsU01ES029519 · NIEHS · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI SPIVACK, SIMON D, VIJG, JAN · 2018 to 2022
$3.6M
(PQB4) Age-cancer interplay of genome and epi-genome in human lungR01CA180126 · NCI · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI AUTON, ADAM, SPIVACK, SIMON D · 2013 to 2016
$2.8M
Integrative, age-related changes in genome and epigenome in human lung in relation to smokingU01HL145560 · NHLBI · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI SPIVACK, SIMON D, VIJG, JAN · 2019 to 2022
$2.6M
NCI NIH HHS R01 CA180126NHLBI NIH HHS U01 HL145560NIA NIH HHS P01 AG017242NIA NIH HHS P01 AG047200NIA NIH HHS P30 AG038072NIA NIH HHS U19 AG056278NIEHS NIH HHS U01 ES029519
6 · The paper itself

Abstract

Although lung cancer risk among smokers is dependent on smoking dose, it remains unknown if this increased risk reflects an increased rate of somatic mutation accumulation in normal lung cells. Here, we applied single-cell whole-genome sequencing of proximal bronchial basal cells from 33 participants aged between 11 and 86 years with smoking histories varying from never-smoking to 116 pack-years. We found an increase in the frequency of single-nucleotide variants and small insertions and deletions with chronological age in never-smokers, with mutation frequencies significantly elevated among smokers. When plotted against smoking pack-years, mutations followed the linear increase in cancer risk until about 23 pack-years, after which no further increase in mutation frequency was observed, pointing toward individual selection for mutation avoidance. Known lung cancer-defined mutation signatures tracked with both age and smoking. No significant enrichment for somatic mutations in lung cancer driver genes was observed.

Indexed as

Lung NeoplasmsSingle-Cell AnalysisAdolescentAdultAgedAged, 80 and overAgingChildEpithelial CellsErbB ReceptorsHumansMiddle AgedMutationSmokingYoung AdultErbB Receptors

Identifiers

PMID35410377
PMCPMC9844147
OpenAlexW4223463067

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.