Evidence map›Paper›PMID 35410160›Full record

ArticleBMC infectious diseases2022

Molecular characterisation of second-line drug resistance among drug resistant tuberculosis patients tested in Uganda: a two and a half-year's review.

Dennis Mujuni, Dianah Linda Kasemire, Ivan Ibanda, Joel Kabugo, Andrew Nsawotebba, Jody E Phelan, Robert Kaos Majwala, Didas Tugumisirize, Abdunoor Nyombi, Beatrice Orena and 6 more

Open access · goldAbstract read
In one paragraph

Article in BMC infectious diseases, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Genomic characterization of drug-resistantFrontiers in tuberculosis · 2026
    Article
  4. Article
  5. Article
  6. Whole genome sequencing of drug resistanceLife science alliance · 2023
    Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 6 institutions in 3 countries.

Dennis MujuniMakerere University, College of Health Sciences, Kampala, Uganda.
Dianah Linda KasemireWorld Health Organisation Supranational Reference Laboratory, Uganda National TB Reference Laboratory, Kampala, Uganda.
Ivan IbandaDepartment of Pharmacology and Toxicology, School of Pharmacy, Kampala International University, Kampala, Uganda.
Joel KabugoWorld Health Organisation Supranational Reference Laboratory, Uganda National TB Reference Laboratory, Kampala, Uganda.
Andrew NsawotebbaWorld Health Organisation Supranational Reference Laboratory, Uganda National TB Reference Laboratory, Kampala, Uganda.
Jody E PhelanFaculty of Infectious & Tropical Diseases, London School of Hygiene & Tropical Medicine, London, UK.
Robert Kaos MajwalaUnited States Agency for International Development, Defeat TB Project, Kampala, Uganda.
Didas TugumisirizeWorld Health Organisation Supranational Reference Laboratory, Uganda National TB Reference Laboratory, Kampala, Uganda.
Abdunoor NyombiWorld Health Organisation Supranational Reference Laboratory, Uganda National TB Reference Laboratory, Kampala, Uganda.
Beatrice OrenaWorld Health Organisation Supranational Reference Laboratory, Uganda National TB Reference Laboratory, Kampala, Uganda.
Irene TuryahabweWorld Health Organisation EPI Laboratory, Uganda Virus Research Institute, Entebbe, Uganda.
Henry ByabajunguWorld Health Organisation Supranational Reference Laboratory, Uganda National TB Reference Laboratory, Kampala, Uganda.
Diana NadungaWorld Health Organisation Supranational Reference Laboratory, Uganda National TB Reference Laboratory, Kampala, Uganda.
Kenneth MusisiWorld Health Organisation Supranational Reference Laboratory, Uganda National TB Reference Laboratory, Kampala, Uganda.
Moses Lutakoome JolobaWorld Health Organisation Supranational Reference Laboratory, Uganda National TB Reference Laboratory, Kampala, Uganda.
Willy SsengoobaDepartment of Medical Microbiology, School of Biomedical Sciences, Makerere University, Kampala, Uganda. willyssengooba@gmail.com.ORCID http://orcid.org/0000-0002-1643-110X
World Health Organization - Uganda · UGMinistry of Health · UGKampala International University · UGLondon School of Hygiene & Tropical Medicine · GBMakerere University · UGUnited States Agency for International Development · US

Funding

NURTURE:Research Training and Mentoring Program for Career Development of Faculty at Makerere University College of Health SciencesD43TW010132 · FIC · MAKERERE UNIVERSITY COLLEGE OF HEALTH SCIENCES · PI SEWANKAMBO, NELSON K · 2015 to 2019
$4.3M
European and Developing Countries Clinical Trials Partnership TMA2018CDF-2351FIC NIH HHS D43 TW010132NIH-NURTURE D43TW010132World Health Organization 001
6 · The paper itself

Abstract

backgroundSecond-line drug resistance (SLD) among tuberculosis (TB) patients is a serious emerging challenge towards global control of the disease. We characterized SLD-resistance conferring-mutations among TB patients with rifampicin and/or isoniazid (RIF and/or INH) drug-resistance tested at the Uganda National TB Reference Laboratory (NTRL) between June 2017 and December 2019.

methodsThis was a descriptive cross-sectional secondary data analysis of 20,508 M. tuberculosis isolates of new and previously treated patients' resistant to RIF and/or INH. DNA strips with valid results to characterise the SLD resistance using the commercial Line Probe Assay Genotype MTBDRsl Version 2.0 Assay (Hain Life Science, Nehren, Germany) were reviewed. Data were analysed with STATAv15 using cross-tabulation for frequency and proportions of known resistance-conferring mutations to injectable agents (IA) and fluoroquinolones (FQ).

resultsAmong the eligible participants, 12,993/20,508 (63.4%) were male and median (IQR) age 32 (24-43). A total of 576/20,508 (2.8%) of the M. tuberculosis isolates from participants had resistance to RIF and/or INH. These included; 102/576 (17.7%) single drug-resistant and 474/576 (82.3%) multidrug-resistant (MDR) strains. Only 102 patients had test results for FQ of whom 70/102 (68.6%) and 01/102 (0.98%) had resistance-conferring mutations in the gyrA locus and gyrB locus respectively. Among patients with FQ resistance, gyrAD94G 42.6% (30.0-55.9) and gyrA A90V 41.1% (28.6-54.3) mutations were most observed. Only one mutation, E540D was detected in the gyrB locus. A total of 26 patients had resistance-conferring mutations to IA in whom, 20/26 77.0% (56.4-91.0) had A1401G mutation in the rrs gene locus.

conclusionsOur study reveals a high proportion of mutations known to confer high-level fluoroquinolone drug-resistance among patients with rifampicin and/or isoniazid drug resistance. Utilizing routinely generated laboratory data from existing molecular diagnostic methods may aid real-time surveillance of emerging tuberculosis drug-resistance in resource-limited settings.

Indexed as

Mycobacterium tuberculosisTuberculosis, Multidrug-ResistantAdultAntitubercular AgentsCross-Sectional StudiesDrug Resistance, Multiple, BacterialFemaleFluoroquinolonesHumansIsoniazidMaleMicrobial Sensitivity TestsMutationRifampinUgandaYoung AdultAntitubercular AgentsFluoroquinolonesIsoniazidRifampinDrug-resistant tuberculosisDrug susceptibility testingMycobacterium tuberculosisSecond line probe assay

Identifiers

PMID35410160
PMCPMC9003953
OpenAlexW4223515834

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.