Evidence map›Paper›PMID 35410130›Full record

ArticleBMC genomics2022

Molecular detection and phylogenetic analysis of pigeon circovirus from racing pigeons in Northern China.

Haoran Wang, Hui Gao, Zhiwen Jiang, Leibo Shi, Pengwei Zhao, Yanming Zhang, Chengbao Wang

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
3.4field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 17 citations in OpenAlex.

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  10. Genome-Based Molecular Diversity of Extended-SpectrumTransboundary and emerging diseases · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Haoran WangCollege of Veterinary Medicine, Northwest A&F University, Yangling, 712100, China.
Hui GaoCollege of Veterinary Medicine, Northwest A&F University, Yangling, 712100, China.
Zhiwen JiangCollege of Veterinary Medicine, Northwest A&F University, Yangling, 712100, China.
Leibo ShiCollege of Veterinary Medicine, Northwest A&F University, Yangling, 712100, China.
Pengwei ZhaoCollege of Veterinary Medicine, Northwest A&F University, Yangling, 712100, China.
Yanming ZhangCollege of Veterinary Medicine, Northwest A&F University, Yangling, 712100, China.
Chengbao WangCollege of Veterinary Medicine, Northwest A&F University, Yangling, 712100, China. wangchengbao@nwafu.edu.cn.ORCID http://orcid.org/0000-0002-1210-9922
Northwest A&F University · CNNorth West Agriculture and Forestry University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundPigeon circovirus (PiCV) infections in pigeons (Columba livia) have been reported worldwide. Currently, pigeon racing is becoming increasingly popular and considered to be a national sport in China, and even, the greatest competitions of racing pigeons are taking place in China. However, there are still no epidemiologic data regarding PiCV infections among racing pigeons in China. The purpose of our study was to provide information of prevalence, genetic variation and evolution of PiCV from racing pigeons in China.

resultsTo trace the prevalence, genetic variation and evolution of PiCV in sick and healthy racing pigeons, 622 samples were collected from 11 provinces or municipalities in China from 2016 to 2019. The results showed that the positive rate of PiCV was 19.3% (120/622) at the sample level and 59.0% (23/39) at the club level, thus suggesting that the virus was prevalent in Chinese racing pigeons. A sequence analysis revealed that the cap genes of the PiCV strains identified in our study displayed a high genetic diversity and shared nucleotide homologies of 71.9%-100% and amino acid homologies of 71.7%-100%. 28 and 36 unique amino acid substitutions were observed in the Cap and Rep proteins derived from our PiCV strains, respectively. A cladogram representation of PiCV strains phylogeny based on 90 cap gene sequences showed that the strains in this study could be further divided into seven clades (A, B, C, E, G, H, and I) and some of them were closely related to worldwide strains from different types of pigeons. A large number of recombination events (31 events) were also detected in the PiCV genomes from Chinese racing pigeons.

conclusionsThese findings indicate that PiCV strains circulating in China exhibit a high genetic diversity and also contribute to information of prevalence, genetic variation and evolution of PiCV from racing pigeons in China.

Indexed as

Bird DiseasesCircoviridae InfectionsCircovirusAnimalsChinaColumbidaePhylogenyGenetic diversityMolecular epidemiologyPhylogenetic analysisPigeon circovirusSequence analysis

Identifiers

PMID35410130
PMCPMC8995411
OpenAlexW4223443117

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.