ArticleBMC genomics2022
Genome-wide analysis of the VQ motif-containing gene family and expression profiles during phytohormones and abiotic stresses in wheat (Triticum aestivum L.).
Article in BMC genomics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.
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19 citing papers in PubMed, 38 citations in OpenAlex.
- Comparative identification of abiotic stress-responsive differentially expressed genes in chickpea using unsupervised machine learning, and traditional meta-analysis.Genes & genomics · 2026Article
- Genome-wide identification and characterization ofFrontiers in plant science · 2026Article
- Plant genotype-specific modulation of Clonostachys rosea-mediated biocontrol of septoria tritici blotch disease in wheat.BMC plant biology · 2025Article
- Genome-wide identification of HbVQ proteins and their interaction with HbWRKY14 to regulate the expression of HbSRPP in Hevea brasiliensis.BMC genomics · 2025Article
- Application of Synthetic Microbial Communities ofInternational journal of molecular sciences · 2025Article
- Genome wide identification and characterization of Bax inhibitor-1 gene family in cucumber (Cucumis sativus) under biotic and abiotic stress.BMC genomics · 2024Article
- Diversity of Expression Patterns ofCurrent issues in molecular biology · 2024Article
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- Genome-wide identification and expression analysis of phytochrome gene family in Aikang58 wheat (Frontiers in plant science · 2024Article
- Large-Scale Identification and Characterization Analysis ofInternational journal of molecular sciences · 2023Article
- Comparative genomics, microsynteny, ancestral state reconstruction and selection pressure analysis across distinctive genomes and sub-genomes of Brassicaceae for analysis of evolutionary history ofPhysiology and molecular biology of plants : an international journal of functional plant biology · 2023Article
- Wheat VQ Motif-Containing Protein VQ25-A Facilitates Leaf Senescence via the Abscisic Acid Pathway.International journal of molecular sciences · 2023Article
- Genome-wide identification and expression analysis of VQ gene family under abiotic stress in Coix lacryma-jobi L.BMC plant biology · 2023Article
- Article
- Genome-wide comparative analysis of the valine glutamine motif containing genes in four Ipomoea species.BMC plant biology · 2023Article
- BRI1 EMS SUPPRESSOR1 genes regulate abiotic stress and anther development in wheat (Frontiers in plant science · 2023Article
- Comprehensive Identification and Expression Profiling of the VQ Motif-Containing Gene Family inBiology · 2022Article
- Genome-wide identification and analysis ofFrontiers in plant science · 2022Article
- Article
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Authors and funding
9 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundVQ motif-containing (VQ) proteins are cofactors of transcriptional regulation that are widely involved in plant growth and development and respond to various stresses. The VQ gene family has been identified and characterized for many plants, but there is little research on VQ gene family proteins in wheat (Triticum aestivum L.).
resultsIn this study, 113 TaVQ genes (40 homoeologous groups) were identified in the wheat genome. TaVQ proteins all contain the conserved motif FxxhVQxhTG, and most of the TaVQ genes do not contain introns. Phylogenetic analysis demonstrated that TaVQ proteins can be divided into 8 subgroups (I-VIII). The chromosomal location mapping analysis indicated that TaVQ genes are disproportionally distributed on 21 wheat chromosomes. Gene duplication analysis revealed that segmental duplication significantly contributes to the expansion of the TaVQ gene family. Gene expression analysis demonstrated that the expression pattern of TaVQ genes varies in different tissues. The results of quantitative real-time PCR (qRT-PCR) found that TaVQ genes displayed different expression levels under different phytohormones and abiotic stresses. The cis-elements analysis of the promoter region demonstrated that stress responses, hormone responses, growth and development, and WRKY binding elements are all widely distributed. Additionally, a potential regulatory network between TaVQ proteins and WRKY transcription factors was visualized.
conclusionThis study systematically analyzed the wheat TaVQ gene family, providing a reference for further functional characterization of TaVQ genes in wheat.
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