Evidence map›Paper›PMID 35410118›Full record

ArticleBMC plant biology2022

Clone and Function Verification of the OPR gene in Brassica napus Related to Linoleic Acid Synthesis.

Min Tan, Juan Niu, Duo Zi Peng, Qian Cheng, Ming Bao Luan, Zhen Qian Zhang

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.3field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 10 citations in OpenAlex.

  1. Deciphering the Interaction betweenLife (Basel, Switzerland) · 2024
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  3. Multiple Functions of MiRNAs inLife (Basel, Switzerland) · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Min TanCollege of Agronomy, Hunan Agricultural University, Changsha, 410128, Hunan, China.
Juan NiuInstitute of Bast Fiber Crops, Chinese Academy of Agricultural Sciences, Changsha, 410205, Hunan, China.
Duo Zi PengCollege of Agronomy, Hunan Agricultural University, Changsha, 410128, Hunan, China.
Qian ChengCollege of Agronomy, Hunan Agricultural University, Changsha, 410128, Hunan, China.
Ming Bao LuanInstitute of Bast Fiber Crops, Chinese Academy of Agricultural Sciences, Changsha, 410205, Hunan, China. luanmingbao@caas.cn.
Zhen Qian ZhangCollege of Agronomy, Hunan Agricultural University, Changsha, 410128, Hunan, China. zzq770204@163.com.
Hunan Agricultural University · CNInstitute of Bast Fiber Crops · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundFatty acid composition and content affect rapeseed oil quality. Fatty acid synthesis-related genes in rapeseed have been studied globally by researchers. Nevertheless, rapeseed oil is mainly composed of seven different fatty acids (FA), and each fatty acid was regulated by different genes. Furthermore, different FA affect each other, which needs continuous and in-depth research to obtain more clear results in Brassica napus.

resultsIn this paper, broad-scale miRNA expression profiles were constructed and 21 differentially expressed miRNAs were detected. GO enrichment analysis showed that most up-regulated proteins were involved in transcription factor activity and catalytic activity. KEGG pathway enrichment analysis indicated that 20 pathways involving 36 target genes were enriched, of which the bna00592 pathway may be involved in fatty acid metabolism. The results were verified using a quantitative real-time PCR (RT-qPCR) analysis, we found that the target gene of bna-miR156b > c > g was the OPR (12-oxo-phytodienoic acid reductase). Four copies of OPR gene were found, and the over-expression vectors (pCAMBIA1300-35 s-OPR and pCAMBIA1300-RNAi-OPR) were constructed to verify their functions. In T

conclusionsThis is the first study to provide four copies of the OPR gene that regulates LA metabolism, can be used for the molecular mechanism of LA and optimizing fatty acid profiles in oilseed for breeding programs.

Indexed as

Brassica napusClone CellsFatty AcidsLinoleic AcidPlant BreedingRapeseed OilFatty AcidsLinoleic AcidRapeseed OilLinoleic acidOPR geneOverexpressionRapeseedRNAi

Identifiers

PMID35410118
PMCPMC9003975
OpenAlexW4223557446

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.