Evidence map›Paper›PMID 35409412›Full record

ArticleInternational journal of molecular sciences2022

Identification of Entry Inhibitors against Delta and Omicron Variants of SARS-CoV-2.

Richard Kuan-Lin Lee, Tian-Neng Li, Sui-Yuan Chang, Tai-Ling Chao, Chun-Hsien Kuo, Max Yu-Chen Pan, Yu-Ting Chiou, Kuan-Ju Liao, Yi Yang, Yi-Hsuan Wu and 4 more

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.8field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
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  6. Prediction of Drug-Target Affinity Using Attention Neural Network.International journal of molecular sciences · 2024
    Article
  7. Natural products as a source of Coronavirus entry inhibitors.Frontiers in cellular and infection microbiology · 2024
    Review
  8. Colloidal aggregation confounds cell-based Covid-19 antiviral screens.bioRxiv : the preprint server for biology · 2023
    Article
  9. Review
  10. Article
  11. Review
  12. Review
  13. Small molecules in the treatment of COVID-19.Signal transduction and targeted therapy · 2022
    Review
  14. Article
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 1 country.

Richard Kuan-Lin LeeInstitute of Molecular and Cellular Biology, College of Life Science, National Tsing Hua University, Hsinchu 300013, Taiwan.
Tian-Neng LiInstitute of Molecular and Cellular Biology, College of Life Science, National Tsing Hua University, Hsinchu 300013, Taiwan.
Sui-Yuan ChangDepartment of Clinical Laboratory Sciences and Medical Biotechnology, College of Medicine, National Taiwan University, Taipei 100225, Taiwan.
Tai-Ling ChaoDepartment of Clinical Laboratory Sciences and Medical Biotechnology, College of Medicine, National Taiwan University, Taipei 100225, Taiwan.ORCID 0000-0002-9815-6702
Chun-Hsien KuoSMOBIO Technology, Inc., Hsinchu 300096, Taiwan.
Max Yu-Chen PanInstitute of Molecular and Cellular Biology, College of Life Science, National Tsing Hua University, Hsinchu 300013, Taiwan.ORCID 0000-0002-8927-9081
Yu-Ting ChiouInstitute of Molecular and Cellular Biology, College of Life Science, National Tsing Hua University, Hsinchu 300013, Taiwan.
Kuan-Ju LiaoInstitute of Bioinformatics and Structural Biology, College of Life Science, National Tsing Hua University, Hsinchu 300013, Taiwan.
Yi YangInstitute of Molecular and Cellular Biology, College of Life Science, National Tsing Hua University, Hsinchu 300013, Taiwan.
Yi-Hsuan WuInstitute of Molecular and Cellular Biology, College of Life Science, National Tsing Hua University, Hsinchu 300013, Taiwan.
Chen-Hao HuangGraduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University, Taipei 106319, Taiwan.
Hsueh-Fen JuanGraduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University, Taipei 106319, Taiwan.ORCID 0000-0003-4876-3309
Hsing-Pang HsiehInstitute of Biotechnology and Pharmaceutical Research, National Health Research Institutes, Miaoli 350401, Taiwan.
Lily Hui-Ching WangInstitute of Molecular and Cellular Biology, College of Life Science, National Tsing Hua University, Hsinchu 300013, Taiwan.ORCID 0000-0003-0659-0139
National Tsing Hua University · TWNational Taiwan University · TWNational Health Research Institutes · TW

Funding

Academia Sinica, Taiwan AS-KPQ-110-EIMDMinistry of Science and Technology, Taiwan MOST-109-2327-B-007-002; MOST-109-2327-B-002-009; MOST-109-3114-Y-001-001National Tsing Hua University, Taiwan 109Q2808E1National Tsing Hua University, Taiwan 110Q2807E1
6 · The paper itself

Abstract

Entry inhibitors against severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) are urgently needed to control the outbreak of coronavirus disease 2019 (COVID-19). This study developed a robust and straightforward assay that detected the molecular interaction between the receptor-binding domain (RBD) of viral spike protein and the angiotensin-converting enzyme 2 (ACE2) receptor in just 10 min. A drug library of 1068 approved compounds was used to screen for SARS-CoV2 entry inhibition, and 9 active drugs were identified as specific pseudovirus entry inhibitors. A plaque reduction neutralization test using authentic SARS-CoV-2 virus in Vero E6 cells confirmed that 2 of these drugs (Etravirine and Dolutegravir) significantly inhibited the infection of SARS-CoV-2. With molecular docking, we showed that both Etravirine and Dolutegravir are preferentially bound to primary ACE2-interacting residues on the RBD domain, implying that these two drug blocks may prohibit the viral attachment of SARS-CoV-2. We compared the neutralizing activities of these entry inhibitors against different pseudoviruses carrying spike proteins from alpha, beta, gamma, and delta variants. Both Etravirine and Dolutegravir showed similar neutralizing activities against different variants, with EC50 values between 4.5 to 5.8 nM for Etravirine and 10.2 to 22.9 nM for Dolutegravir. These data implied that Etravirine and Dolutegravir may serve as general spike inhibitors against dominant viral variants of SARS-CoV-2.

Indexed as

COVID-19 Drug TreatmentSARS-CoV-2Angiotensin-Converting Enzyme 2HumansMolecular Docking SimulationRNA, ViralSpike Glycoprotein, CoronavirusAngiotensin-Converting Enzyme 2RNA, ViralSpike Glycoprotein, Coronavirusspike protein, SARS-CoV-2ACE2COVID-19entry inhibitorreceptor-binding domainSARS-CoV-2viral entry

Identifiers

PMID35409412
PMCPMC8999638
OpenAlexW4223485325

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.