Evidence map›Paper›PMID 35406897›Full record

ArticlePlants (Basel, Switzerland)2022

Genome-Wide Identification and Characterisation of Cytokinin-O-Glucosyltransferase (CGT) Genes of Rice Specific to Potential Pathogens.

Wadzani Palnam Dauda, Veerubommu Shanmugam, Aditya Tyagi, Amolkumar U Solanke, Vishesh Kumar, Subbaiyan Gopala Krishnan, Bishnu Maya Bashyal, Rashmi Aggarwal

Open access · goldAbstract read
In one paragraph

Article in Plants (Basel, Switzerland), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed, 1 pooled it
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 1 synthesis or guideline pooled it, 11 citations in OpenAlex.

  1. Frontiers in plant science · 2022
    Pooled it
  2. Article
  3. Article
  4. Genome-wide association study and molecular marker development for susceptibility to Gibberella ear rot in maize.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Wadzani Palnam DaudaICAR-Indian Agricultural Research Institute, New Delhi 110012, India.ORCID 0000-0002-5233-0058
Veerubommu ShanmugamICAR-Indian Agricultural Research Institute, New Delhi 110012, India.ORCID 0000-0003-4534-6657
Aditya TyagiICAR-Indian Agricultural Research Institute, New Delhi 110012, India.
Amolkumar U SolankeICAR-National Institute for Plant Biotechnology, New Delhi 110012, India.ORCID 0000-0001-8567-7691
Vishesh KumarICAR-National Institute for Plant Biotechnology, New Delhi 110012, India.
Subbaiyan Gopala KrishnanICAR-Indian Agricultural Research Institute, New Delhi 110012, India.ORCID 0000-0003-3443-8767
Bishnu Maya BashyalICAR-Indian Agricultural Research Institute, New Delhi 110012, India.
Rashmi AggarwalICAR-Indian Agricultural Research Institute, New Delhi 110012, India.
Indian Agricultural Research Institute · INNational Research Centre on Plant Biotechnology · INFederal University of Agriculture · NG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cytokinin glucosyltransferases (CGTs) are key enzymes of plants for regulating the level and function of cytokinins. In a genomic identification of rice CGTs, 41 genes with the plant secondary product glycosyltransferases (PSPG) motif of 44-amino-acid consensus sequence characteristic of plant uridine diphosphate (UDP)-glycosyltransferases (UGTs) were identified. In-silico physicochemical characterisation revealed that, though the CGTs belong to the same subfamily, they display varying molecular weights, ranging from 19.6 kDa to 59.7 kDa. The proteins were primarily acidic (87.8%) and hydrophilic (58.6%) and were observed to be distributed in the plastids (16), plasma membrane (13), mitochondria (5), and cytosol (4). Phylogenetic analysis of the CGTs revealed that their evolutionary relatedness ranged from 70-100%, and they aligned themselves into two major clusters. In a comprehensive analysis of the available transcriptomics data of rice samples representing different growth stages only the CGT,

Indexed as

bacterial leaf blight (BLB)blastcytokinin glycosyltransferases (CGTs)family 1 glycosyltransferases (GT1s)plant secondary product glycosyltransferases (PSPG)ricesheath blight (ShB)

Identifiers

PMID35406897
PMCPMC9002877
OpenAlexW4221058283

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.