Evidence map›Paper›PMID 35404098›Full record

ArticleMicrobiology spectrum2022

Culture on Selective Media and Amplicon-Based Sequencing of 16S rRNA from Spontaneous Brain Abscess-the View from the Diagnostic Laboratory.

Camilla Andersen, Bo Bergholt, Winnie Ridderberg, Niels Nørskov-Lauritsen

Open access · goldAbstract read
In one paragraph

Article in Microbiology spectrum, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.2field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 17 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Future microbiology · 2025
    Review
  6. Article
  7. Review
  8. Access microbiology · 2023
    Article
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Camilla AndersenDepartment of Clinical Microbiology, Aarhus University Hospitalgrid.154185.c, Aarhus, Denmark.
Bo BergholtDepartment of Neurosurgery, Aarhus University Hospitalgrid.154185.c, Aarhus, Denmark.
Winnie RidderbergDepartment of Clinical Microbiology, Aarhus University Hospitalgrid.154185.c, Aarhus, Denmark.
Niels Nørskov-LauritsenDepartment of Clinical Microbiology, Aarhus University Hospitalgrid.154185.c, Aarhus, Denmark.ORCID 0000-0001-5520-106X
Aarhus University Hospital · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Forty-one stored samples from cases of spontaneous brain abscess were investigated to gain insight into the natural history, causative agents, and relevant laboratory diagnostics of a rare infection. Samples from a larger collection were selected based on retrospective analysis of patient records. All samples were subjected to amplicon sequencing of 16S rRNA gene fragments. Supplementary culture on selected media was performed as suggested by bioinformatics analysis. For three cases, no microorganism was disclosed, while Toxoplasma gondii, Aspergillus fumigatus, and various bacteria were the cause of 1, 2, and 35 cases, respectively. Bacterial infections were monomicrobial in 20 cases and polymicrobial in 15; the microorganisms of the latter cases were restricted to residents of cavum oris. Amplicon sequencing did not further enhance the importance of the Streptococcus anginosus group, which was involved in 17 cases, and the single primer set used may be suboptimal for amplification of

Indexed as

Brain AbscessCoinfectionBacteriaFusobacterium nucleatumHumansRetrospective StudiesRNA, Ribosomal, 16SRNA, Ribosomal, 16SFusobacteriumodontogenic infectionoropharyngeal microbiotaParvimonaspolymicrobial

Identifiers

PMID35404098
PMCPMC9045185
OpenAlexW4223499482

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.