Evidence map›Paper›PMID 35403927›Full record

ArticleAMB Express2022

Basis for using thioredoxin as an electron donor by Schizosaccharomyces pombe Gpx1 and Tpx1.

Fawad Ahmad, Muhammad Faizan Latif, Ying Luo, Ying Huang

Open access · goldAbstract read
In one paragraph

Article in AMB Express, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 49% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Fawad Ahmad *Jiangsu Key Laboratory for Microbes and Genomics, Department of Microbiology, School of Life Sciences, Nanjing Normal University, 1 Wenyuan Road, Nanjing, 210023, China.
Muhammad Faizan Latif *Jiangsu Key Laboratory for Microbes and Genomics, Department of Microbiology, School of Life Sciences, Nanjing Normal University, 1 Wenyuan Road, Nanjing, 210023, China.
Ying LuoJiangsu Key Laboratory for Microbes and Genomics, Department of Microbiology, School of Life Sciences, Nanjing Normal University, 1 Wenyuan Road, Nanjing, 210023, China.
Ying HuangJiangsu Key Laboratory for Microbes and Genomics, Department of Microbiology, School of Life Sciences, Nanjing Normal University, 1 Wenyuan Road, Nanjing, 210023, China. yhuang@njnu.edu.cn.ORCID http://orcid.org/0000-0001-8469-5185
Nanjing Normal University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Glutathione (GSH) peroxidases (GPxs or GSHPx) and thioredoxin (Trx) peroxidases (TPxs) are two classes of peroxidases that catalyze the reduction of peroxides. GPxs and TPxs generally use GSH or Trx, respectively, to recycle the oxidized cysteine (Cys) residue in the protein. However, it is unclear why unlike human GPxs, the Schizosaccharomyces pombe Gpx1 (spGpx1) prefers Trx over GSH for recycling of the active-site peroxidatic Cys residue. Here, we compared spGpx1 and S. pombe Tpx1 (spTpx1) protein sequences with those of their respective homologs in Saccharomyces cerevisiae and humans. Our analysis revealed that like spTpx1, spGpx1 contains a pair of conserved Cys residues (Cys36 and Cys82). These two conserved Cys residues are named peroxidatic and resolving Cys residues, respectively, and are found only in GPxs and TPxs that prefer Trx as an electron donor. Our analysis suggested that Cys36 and Cys82 in spGpx1 are most likely to form a disulfide bond upon oxidation of Cys36. Molecular modelling predicted that a conformational change might be required for the formation of this disulfide bond. Evolutionary analysis suggested that fungal GPxs and TPxs are related by divergent evolution from a common ancestor. Our analyses support a prediction that while spGpx1 and spTpx1 are phylogenetically and functionally different, they evolved from a common ancestor and use a similar mechanism for recycling of the active-site peroxidatic Cys residue.

Indexed as

GSH peroxidaseReactive oxygen species (ROS)Schizosaccharomyces pombeTrx peroxidase

Identifiers

PMID35403927
PMCPMC9001804
OpenAlexW4223466265

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.