Evidence map›Paper›PMID 35401090›Full record

ArticleFrontiers in neuroscience2022

Ridge Penalization in High-Dimensional Testing With Applications to Imaging Genetics.

Iris Ivy Gauran, Gui Xue, Chuansheng Chen, Hernando Ombao, Zhaoxia Yu

Abstract read
In one paragraph

Article in Frontiers in neuroscience, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Roles of naïve CD4Journal of translational medicine · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Iris Ivy GauranBiostatistics Group, Computer, Electrical, Mathematical Sciences, and Engineering Division, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia.
Gui XueCenter for Brain and Learning Science, Beijing Normal University, Beijing, China.
Chuansheng ChenDepartment of Psychological Science, University of California, Irvine, Irvine, CA, United States.
Hernando OmbaoBiostatistics Group, Computer, Electrical, Mathematical Sciences, and Engineering Division, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia.
Zhaoxia YuDepartment of Statistics, University of California, Irvine, Irvine, CA, United States.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

High-dimensionality is ubiquitous in various scientific fields such as imaging genetics, where a deluge of functional and structural data on brain-relevant genetic polymorphisms are investigated. It is crucial to identify which genetic variations are consequential in identifying neurological features of brain connectivity compared to merely random noise. Statistical inference in high-dimensional settings poses multiple challenges involving analytical and computational complexity. A widely implemented strategy in addressing inference goals is penalized inference. In particular, the role of the ridge penalty in high-dimensional prediction and estimation has been actively studied in the past several years. This study focuses on ridge-penalized tests in high-dimensional hypothesis testing problems by proposing and examining a class of methods for choosing the optimal ridge penalty. We present our findings on strategies to improve the statistical power of ridge-penalized tests and what determines the optimal ridge penalty for hypothesis testing. The application of our work to an imaging genetics study and biological research will be presented.

Indexed as

genome-wide association studieshigh-dimensional testingimaging geneticsneuroimagingridge penalization

Identifiers

PMID35401090
PMCPMC8987922

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.