Evidence map›Paper›PMID 35395405›Full record

ArticleTravel medicine and infectious disease

Detection of the Omicron variant of SARS-CoV-2 in international travelers returning to Venezuela.

Rossana C Jaspe, Yoneira Sulbaran, Carmen L Loureiro, Zoila C Moros, Ernestina Marulanda, Francis Bracho, Nieves A Ramírez, Yeilis Canonico, Pierina D'Angelo, Lieska Rodríguez and 4 more

Open access · greenAbstract read
In one paragraph

Article in Travel medicine and infectious disease. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 1 country.

Rossana C JaspeLaboratorio de Virología Molecular, Centro de Microbiología y Biología Celular, Instituto Venezolano de Investigaciones Científicas, Caracas, Miranda, Venezuela.
Yoneira SulbaranLaboratorio de Virología Molecular, Centro de Microbiología y Biología Celular, Instituto Venezolano de Investigaciones Científicas, Caracas, Miranda, Venezuela.
Carmen L LoureiroLaboratorio de Virología Molecular, Centro de Microbiología y Biología Celular, Instituto Venezolano de Investigaciones Científicas, Caracas, Miranda, Venezuela.
Zoila C MorosLaboratorio de Biología de Virus, Centro de Microbiología y Biología Celular, Instituto Venezolano de Investigaciones Científicas, Caracas, Venezuela.
Ernestina MarulandaLaboratorio de Biología Molecular Casa Lab 2020, Caracas, Venezuela.
Francis BrachoLaboratorio de Biología Molecular Casa Lab 2020, Caracas, Venezuela.
Nieves A RamírezLaboratorio de Biología Molecular Tu Buen Doctor, Caracas, Venezuela.
Yeilis CanonicoLaboratorio de Biología Molecular Tu Buen Doctor, Caracas, Venezuela.
Pierina D'AngeloInstituto Nacional de Higiene "Rafael Rangel", Caracas, Miranda, Venezuela.
Lieska RodríguezInstituto Nacional de Higiene "Rafael Rangel", Caracas, Miranda, Venezuela.
Julio CastroPoliclínica Metropolitana, Caracas, Venezuela.
Ferdinando LiprandiLaboratorio de Biología de Virus, Centro de Microbiología y Biología Celular, Instituto Venezolano de Investigaciones Científicas, Caracas, Venezuela.
Héctor R RangelLaboratorio de Virología Molecular, Centro de Microbiología y Biología Celular, Instituto Venezolano de Investigaciones Científicas, Caracas, Miranda, Venezuela.
Flor H PujolLaboratorio de Virología Molecular, Centro de Microbiología y Biología Celular, Instituto Venezolano de Investigaciones Científicas, Caracas, Miranda, Venezuela. Electronic address: fhpujol@gmail.com.
Instituto Venezolano de Investigaciones Científicas · VEUniversidad Nacional Experimental Francisco de Miranda · VEPoliclinica Metropolitana · VE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundBy the end of 2021, the SARS-CoV-2 Variant of Concern (VOC) Delta was predominant in most of the world. At the end of November, the Omicron variant was first detected in South Africa. This variant was immediately classified as VOC, due to the explosive increase of cases in South Africa, and the great number of mutations exhibited by this new lineage. Since then, Omicron VOC displaced Delta one in almost every country. Venezuela implemented in May 2021 molecular testing of all the passengers arriving at Venezuelan airports.

methodsIn this study, we analyzed the presence of variants of SARS-CoV-2 in those positive samples, by sequencing a small fragment of the Spike genomic region.

resultsThe Omicron variant was found in passengers arriving to Venezuela from the beginning of December. Complete genome analysis confirmed the presence of the Omicron VOC. The detection of this VOC coincided with an unprecedented increase in the frequency of passengers with positive nucleic acid testing.

conclusionsGenomic surveillance of samples for international travelers returning to Venezuela allowed us to rapidly detect the introduction of the Omicron variant in the country.

Indexed as

COVID-19SARS-CoV-2Genome, ViralHumansVenezuelaCOVID-19International travelsMutationsOmicron variant of concernSARS-CoV-2

Identifiers

PMID35395405
PMCPMC8982480
OpenAlexW4223573973

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.