Evidence map›Paper›PMID 35394879›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2022

Advanced age increases frequencies of de novo mitochondrial mutations in macaque oocytes and somatic tissues.

Barbara Arbeithuber, Marzia A Cremona, James Hester, Alison Barrett, Bonnie Higgins, Kate Anthony, Francesca Chiaromonte, Francisco J Diaz, Kateryna D Makova

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 32 citations in OpenAlex.

  1. Review
  2. The Hallmarks of Aging: From Molecular Mechanisms to Clinical Translation.International journal of molecular sciences · 2026
    Review
  3. Review
  4. Article
  5. Article
  6. De novo rates of aProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Review
  12. Mitochondrial DNA Damage and Its Repair Mechanisms in Aging Oocytes.International journal of molecular sciences · 2024
    Review
  13. Article
  14. Article
  15. Article
  16. Ovarian aging: energy metabolism of oocytes.Journal of ovarian research · 2024
    Review
  17. AMPK Suppression Due to Obesity Drives Oocyte mtDNA Heteroplasmy via ATF5-POLG Axis.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2024
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 4 countries.

Barbara ArbeithuberDepartment of Biology, The Pennsylvania State University, University Park, PA 16802.ORCID 0000-0001-8367-1560
Marzia A CremonaDepartment of Operations and Decision Systems, Université Laval, Québec, QC G1V0A6, Canada.ORCID 0000-0001-8899-7316
James HesterDepartment of Animal Science, The Pennsylvania State University, University Park, PA 16802.
Alison BarrettDepartment of Biology, The Pennsylvania State University, University Park, PA 16802.
Bonnie HigginsDepartment of Biology, The Pennsylvania State University, University Park, PA 16802.
Kate AnthonyDepartment of Biology, The Pennsylvania State University, University Park, PA 16802.
Francesca ChiaromonteCenter for Medical Genomics, The Pennsylvania State University, University Park, PA 16802.
Francisco J DiazDepartment of Animal Science, The Pennsylvania State University, University Park, PA 16802.ORCID 0000-0002-2875-7393
Kateryna D MakovaDepartment of Biology, The Pennsylvania State University, University Park, PA 16802.ORCID 0000-0002-6212-9526
Pennsylvania State University · US

Funding

Upgrade of confocal microscopy at the Oregon National Primate Research CenterP51OD011092 · OD · OREGON HEALTH & SCIENCE UNIVERSITY · PI Bonnie J. Nagel · 2012 to 2026
$203.9M
The Dynamics of Mitochondrial MutationsR01GM116044 · NIGMS · PENNSYLVANIA STATE UNIVERSITY, THE · PI MAKOVA, KATERYNA, NIELSEN, RASMUS · 2015 to 2018
$2.4M
NIGMS NIH HHS R01 GM116044NIH HHS P51 OD011092
6 · The paper itself

Abstract

Mutations in mitochondrial DNA (mtDNA) contribute to multiple diseases. However, how new mtDNA mutations arise and accumulate with age remains understudied because of the high error rates of current sequencing technologies. Duplex sequencing reduces error rates by several orders of magnitude via independently tagging and analyzing each of the two template DNA strands. Here, using duplex sequencing, we obtained high-quality mtDNA sequences for somatic tissues (liver and skeletal muscle) and single oocytes of 30 unrelated rhesus macaques, from 1 to 23 y of age. Sequencing single oocytes minimized effects of natural selection on germline mutations. In total, we identified 17,637 tissue-specific de novo mutations. Their frequency increased ∼3.5-fold in liver and ∼2.8-fold in muscle over the ∼20 y assessed. Mutation frequency in oocytes increased ∼2.5-fold until the age of 9 y, but did not increase after that, suggesting that oocytes of older animals maintain the quality of their mtDNA. We found the light-strand origin of replication (OriL) to be a hotspot for mutation accumulation with aging in liver. Indeed, the 33-nucleotide-long OriL harbored 12 variant hotspots, 10 of which likely disrupt its hairpin structure and affect replication efficiency. Moreover, in somatic tissues, protein-coding variants were subject to positive selection (potentially mitigating toxic effects of mitochondrial activity), the strength of which increased with the number of macaques harboring variants. Our work illuminates the origins and accumulation of somatic and germline mtDNA mutations with aging in primates and has implications for delayed reproduction in modern human societies.

Indexed as

AgingMitochondriaMutationOocytesAnimalsDNA, MitochondrialHumansMacaca mulattaDNA, Mitochondrialduplex sequencingheteroplasmymitochondriamutationsoocytes

Identifiers

PMID35394879
PMCPMC9169796
OpenAlexW4223563252

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.