Evidence map›Paper›PMID 35394876›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2022

Origin and early evolution of the plant terpene synthase family.

Qidong Jia, Reid Brown, Tobias G Köllner, Jianyu Fu, Xinlu Chen, Gane Ka-Shu Wong, Jonathan Gershenzon, Reuben J Peters, Feng Chen

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 112 papers.

0numbers the graph read from it
0cells of the map it votes in
112citing papers in PubMed
14.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

112 citing papers in PubMed, 178 citations in OpenAlex.

  1. Review
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  4. Review
  5. Review
  6. Terpenoids fromPlants (Basel, Switzerland) · 2026
    Review
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  11. Review
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52 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 4 countries.

Qidong JiaGraduate School of Genome Science and Technology, The University of Tennessee, Knoxville, TN 37996.
Reid BrownRoy J. Carver Department of Biochemistry, Biophysics and Molecular Biology, Iowa State University, Ames, IA 50011.
Tobias G KöllnerDepartment of Biochemistry, Max Planck Institute of Chemical Ecology, 07745 Jena, Germany.
Jianyu FuTea Research Institute, Chinese Academy of Agricultural Sciences, Hangzhou 310008, China.ORCID 0000-0003-0216-0000
Xinlu ChenDepartment of Plant Sciences, The University of Tennessee, Knoxville, TN 37996.ORCID 0000-0002-7560-6125
Gane Ka-Shu WongBGI-Shenzhen, Shenzhen 518083, China.ORCID 0000-0001-6108-5560
Jonathan GershenzonDepartment of Biochemistry, Max Planck Institute of Chemical Ecology, 07745 Jena, Germany.ORCID 0000-0002-1812-1551
Reuben J PetersRoy J. Carver Department of Biochemistry, Biophysics and Molecular Biology, Iowa State University, Ames, IA 50011.ORCID 0000-0003-4691-8477
Feng ChenGraduate School of Genome Science and Technology, The University of Tennessee, Knoxville, TN 37996.ORCID 0000-0002-3267-4646
University of Tennessee at Knoxville · USIowa State University · USMax Planck Institute for Chemical Ecology · DEBGI Group (China) · CNChinese Academy of Agricultural Sciences · CN

Funding

Purchase of replacement GC-MS for Peters R35/MIRA (GM131885)R35GM131885 · NIGMS · IOWA STATE UNIVERSITY · PI PETERS, REUBEN JOHN · 2019 to 2023
$2.6M
NIGMS NIH HHS R35 GM131885
6 · The paper itself

Abstract

As a midsized gene family conserved more by lineage than function, the typical plant terpene synthases (TPSs) could be a valuable tool to examine plant evolution. TPSs are pivotal in biosynthesis of gibberellins and related phytohormones as well as in formation of the extensive arsenal of specialized plant metabolites mediating ecological interactions whose production is often lineage specific. Yet the origin and early evolution of the TPS family is not well understood. Systematic analysis of an array of transcriptomes and sequenced genomes indicated that the TPS family originated after the divergence of land plants from charophytic algae. Phylogenetic and biochemical analyses support the hypothesis that the ancestral TPS gene encoded a bifunctional class I and II diterpene synthase producing the ent-kaurene required for phytohormone production in all extant lineages of land plants. Moreover, the ancestral TPS gene likely underwent duplication at least twice early in land plant evolution. Together these two gave rise to three TPS lineages leading to the extant TPS-c, TPS-e/f, and the remaining TPS (h/d/a/b/g) subfamilies, with the latter dedicated to secondary rather than primary metabolism while the former two contain those genes involved in ent-kaurene production. Nevertheless, parallel evolution from the ent-kaurene–producing class I and class II diterpene synthases has led to roles for TPS-e/f and -c subfamily members in secondary metabolism as well. These results clarify TPS evolutionary history and provide context for the role of these genes in producing the vast diversity of terpenoid natural products observed today in various land plant lineages.

Indexed as

Alkyl and Aryl TransferasesEmbryophytaEvolution, MolecularPlant ProteinsGene DuplicationPhylogenyPlant Growth RegulatorsTerpenesAlkyl and Aryl TransferasesPlant Growth RegulatorsPlant ProteinsTerpenesterpene synthasediterpene synthasesnonseed plantssecondary metabolitesterpenoids

Identifiers

PMID35394876
PMCPMC9169658
OpenAlexW4223484234

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.