Evidence map›Paper›PMID 35393565›Full record

ArticleNature biomedical engineering2022

Rapid cloning of antigen-specific T-cell receptors by leveraging the cis activation of T cells.

Eiji Kobayashi, Aishun Jin, Hiroshi Hamana, Kiyomi Shitaoka, Kazuto Tajiri, Seisuke Kusano, Shigeyuki Yokoyama, Tatsuhiko Ozawa, Tsutomu Obata, Atsushi Muraguchi and 1 more

Abstract read
PubMed Publisher
In one paragraph

Article in Nature biomedical engineering, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Intranodal injection of neoantigen-bearing engineeredActa pharmaceutica Sinica. B · 2025
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  4. Annual review of cell and developmental biology · 2023
    Review
  5. Prediction of protein-ligand binding affinity with deep learning.Computational and structural biotechnology journal · 2023
    Review
  6. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 2 countries.

Eiji Kobayashi *Department of Immunology, Faculty of Medicine, Academic Assembly, University of Toyama, Toyama, Japan.ORCID http://orcid.org/0000-0002-7303-2797
Aishun Jin *Department of Immunology, Faculty of Medicine, Academic Assembly, University of Toyama, Toyama, Japan.ORCID http://orcid.org/0000-0001-9746-4220
Hiroshi HamanaDepartment of Immunology, Faculty of Medicine, Academic Assembly, University of Toyama, Toyama, Japan.ORCID http://orcid.org/0000-0002-6964-1020
Kiyomi ShitaokaDepartment of Immunology, Faculty of Medicine, Academic Assembly, University of Toyama, Toyama, Japan.
Kazuto TajiriDepartment of Immunology, Faculty of Medicine, Academic Assembly, University of Toyama, Toyama, Japan.
Seisuke KusanoRIKEN Cluster for Science, Technology and Innovation Hub, Yokohama, Japan.
Shigeyuki YokoyamaRIKEN Cluster for Science, Technology and Innovation Hub, Yokohama, Japan.ORCID http://orcid.org/0000-0003-3133-7338
Tatsuhiko OzawaDepartment of Immunology, Faculty of Medicine, Academic Assembly, University of Toyama, Toyama, Japan.ORCID http://orcid.org/0000-0002-3112-452X
Tsutomu ObataToyama Industrial Technology Research and Development Center, Takaoka, Japan.
Atsushi MuraguchiDepartment of Immunology, Faculty of Medicine, Academic Assembly, University of Toyama, Toyama, Japan.
Hiroyuki KishiDepartment of Immunology, Faculty of Medicine, Academic Assembly, University of Toyama, Toyama, Japan. immkishi@med.u-toyama.ac.jp.ORCID http://orcid.org/0000-0002-8740-5371
University of Toyama · JPRIKEN Center for Sustainable Resource Science · JPHarbin Medical University · CNHiroshima University · JPToyama College · JPToyama Industrial Technology Center · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

It is commonly understood that T cells are activated via trans interactions between antigen-specific T-cell receptors (TCRs) and antigenic peptides presented on major histocompatibility complex (MHC) molecules on antigen-presenting cells. By analysing a large number of T cells at the single-cell level on a microwell array, we show that T-cell activation can occur via cis interactions (where TCRs on the T cell interact with the antigenic peptides presented on MHC class-I molecules on the same cell), and that such cis activation can be used to detect antigen-specific T cells and clone their TCR within 4 d. We used the detection-and-cloning system to clone a tumour-antigen-specific TCR from peripheral blood mononuclear cells of healthy donors. TCR cloning by leveraging the cis activation of T cells may facilitate the development of TCR-engineered T cells for cancer therapy.

Indexed as

Leukocytes, MononuclearT-LymphocytesAntigens, NeoplasmCloning, MolecularPeptidesReceptors, Antigen, T-CellAntigens, NeoplasmPeptidesReceptors, Antigen, T-Cell

Identifiers

PMID35393565
OpenAlexW4225637095

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.