Evidence map›Paper›PMID 35393473›Full record

ArticleScientific reports2022

Usp5, Usp34, and Otu1 deubiquitylases mediate DNA repair in Drosophila melanogaster.

Zoltán G Páhi, Levente Kovács, Diána Szűcs, Barbara N Borsos, Péter Deák, Tibor Pankotai

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.0field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 11 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Zoltán G PáhiInstitute of Pathology, Albert Szent-Györgyi Medical School, University of Szeged, 1 Állomás Street, 6725, Szeged, Hungary.
Levente KovácsDivison of Biology and Biological Engineering, California Institute of Tehnology, 1200 East California Boulevard, Pasadena, 91125, USA.
Diána SzűcsInstitute of Pathology, Albert Szent-Györgyi Medical School, University of Szeged, 1 Állomás Street, 6725, Szeged, Hungary.
Barbara N BorsosInstitute of Pathology, Albert Szent-Györgyi Medical School, University of Szeged, 1 Állomás Street, 6725, Szeged, Hungary.
Péter DeákDepartment of Genetics, Faculty of Sciences and Informatics, University of Szeged, 52 Közép fasor, 6726, Szeged, Hungary.
Tibor PankotaiInstitute of Pathology, Albert Szent-Györgyi Medical School, University of Szeged, 1 Állomás Street, 6725, Szeged, Hungary. pankotai.tibor@szte.hu.
University of Szeged · HUCalifornia Institute of Technology · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ubiquitylation is critical for preventing aberrant DNA repair and for efficient maintenance of genome stability. As deubiquitylases (DUBs) counteract ubiquitylation, they must have a great influence on many biological processes, including DNA damage response. To elucidate the role of DUBs in DNA repair in Drosophila melanogaster, systematic siRNA screening was applied to identify DUBs with a reduced survival rate following exposure to ultraviolet and X-ray radiations. As a secondary validation, we applied the direct repeat (DR)-white reporter system with which we induced site-specific DSBs and affirmed the importance of the DUBs Ovarian tumor domain-containing deubiquitinating enzyme 1 (Otu1), Ubiquitin carboxyl-terminal hydrolase 5 (Usp5), and Ubiquitin carboxyl-terminal hydrolase 34 (Usp34) in DSB repair pathways using Drosophila. Our results indicate that the loss of Otu1 and Usp5 induces strong position effect variegation in Drosophila eye following I-SceI-induced DSB deployment. Otu1 and Usp5 are essential in DNA damage-induced cellular response, and both DUBs are required for the fine-tuned regulation of the non-homologous end joining pathway. Furthermore, the Drosophila DR-white assay demonstrated that homologous recombination does not occur in the absence of Usp34, indicating an indispensable role of Usp34 in this process.

Indexed as

DNA RepairDrosophila melanogasterDrosophila ProteinsUbiquitin-Specific ProteasesAnimalsHydrolasesUbiquitinUbiquitinationDrosophila ProteinsHydrolasesUbiquitinUbiquitin-Specific ProteasesUSP5 protein, Drosophila

Identifiers

PMID35393473
PMCPMC8990000
OpenAlexW4223447321

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.