Evidence map›Paper›PMID 35392220›Full record

ArticleFrontiers in oncology2022

Exome and Tissue-Associated Microbiota as Predictive Markers of Response to Neoadjuvant Treatment in Locally Advanced Rectal Cancer.

Isabella Kuniko T M Takenaka, Thais F Bartelli, Alexandre Defelicibus, Juan M Sendoya, Mariano Golubicki, Juan Robbio, Marianna S Serpa, Gabriela P Branco, Luana B C Santos, Laura C L Claro and 10 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in oncology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 1 pooled it
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 1 synthesis or guideline pooled it, 11 citations in OpenAlex.

  1. Pooled it
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  13. Distinct Driver Pathway Enrichments and a High Prevalence ofInternational journal of molecular sciences · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 3 institutions in 2 countries.

Isabella Kuniko T M TakenakaMedical Genomics Laboratory, International Center for Research, A.C.Camargo Cancer Center, São Paulo, Brazil.
Thais F BartelliMedical Genomics Laboratory, International Center for Research, A.C.Camargo Cancer Center, São Paulo, Brazil.
Alexandre DefelicibusLaboratory of Bioinformatics and Computational Biology, International Center for Research, A.C. Camargo Cancer Center, São Paulo, Brazil.
Juan M SendoyaLaboratorio de Terapia Molecular y Celular - Genomics Unit, Fundación Instituto Leloir, Buenos Aires, Argentina.
Mariano GolubickiOncology Unit, Hospital de Gastroenterología Carlos Bonorino Udaondo, Buenos Aires, Argentina.
Juan RobbioClinical Oncology, Intergrupo Argentino para el Tratamiento de los Tumores Gastrointestinales (IATTGI), Buenos Aires, Argentina.
Marianna S SerpaMedical Genomics Laboratory, International Center for Research, A.C.Camargo Cancer Center, São Paulo, Brazil.
Gabriela P BrancoMedical Genomics Laboratory, International Center for Research, A.C.Camargo Cancer Center, São Paulo, Brazil.
Luana B C SantosMedical Genomics Laboratory, International Center for Research, A.C.Camargo Cancer Center, São Paulo, Brazil.
Laura C L ClaroDepartment of Pathology, A.C.Camargo Cancer Center, São Paulo, Brazil.
Gabriel Oliveira Dos SantosDepartment of Pathology, A.C.Camargo Cancer Center, São Paulo, Brazil.
Bruna E C KupperColorectal Cancer Department, A.C.Camargo Cancer Center, São Paulo, Brazil.
Israel T da SilvaLaboratory of Bioinformatics and Computational Biology, International Center for Research, A.C. Camargo Cancer Center, São Paulo, Brazil.
Andrea S LleraLaboratorio de Terapia Molecular y Celular - Genomics Unit, Fundación Instituto Leloir, Buenos Aires, Argentina.
Celso A L de MelloDepartment of Clinical Oncology, A.C.Camargo Cancer Center, São Paulo, Brazil.
Rachel P RiechelmannDepartment of Clinical Oncology, A.C.Camargo Cancer Center, São Paulo, Brazil.
Emmanuel Dias-NetoMedical Genomics Laboratory, International Center for Research, A.C.Camargo Cancer Center, São Paulo, Brazil.
Soledad IseasOncology Unit, Hospital de Gastroenterología Carlos Bonorino Udaondo, Buenos Aires, Argentina.
Samuel AguiarColorectal Cancer Department, A.C.Camargo Cancer Center, São Paulo, Brazil.
Diana Noronha NunesMedical Genomics Laboratory, International Center for Research, A.C.Camargo Cancer Center, São Paulo, Brazil.
AC Camargo Hospital · BRConsejo Nacional de Investigaciones Científicas y Técnicas · ARInstituto Argentino de Diagnóstico y Tratamiento · AR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The clinical and pathological responses to multimodal neoadjuvant therapy in locally advanced rectal cancers (LARCs) remain unpredictable, and robust biomarkers are still lacking. Recent studies have shown that tumors present somatic molecular alterations related to better treatment response, and it is also clear that tumor-associated bacteria are modulators of chemotherapy and immunotherapy efficacy, therefore having implications for long-term survivorship and a good potential as the biomarkers of outcome. Here, we performed whole exome sequencing and 16S ribosomal RNA (rRNA) amplicon sequencing from 44 pre-treatment LARC biopsies from Argentinian and Brazilian patients, treated with neoadjuvant chemoradiotherapy or total neoadjuvant treatment, searching for predictive biomarkers of response (responders,

Indexed as

biomarkers of treatment responselocally advanced rectal cancermicrobiotamutational signaturesneoadjuvant chemoradiotherapywhole exome sequencing

Identifiers

PMID35392220
PMCPMC8982181
OpenAlexW4220973096

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.