Evidence map›Paper›PMID 35391791›Full record

ArticleFrontiers in genetics2022

Identification of QTLs/ Candidate Genes for Seed Mineral Contents in Common Bean (

Muslima Nazir, Reetika Mahajan, Sheikh Mansoor, Sheezan Rasool, Rakeeb Ahmad Mir, Ravinder Singh, Vandana Thakral, Virender Kumar, Parvaze A Sofi, Hamed A El-Serehy and 2 more

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Article in Frontiers in genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 3 countries.

Muslima NazirProteomics Laboratory, Division of Plant Biotechnology, Sher-e-Kashmir University of Agricultural Sciences and Technology of Kashmir, Srinagar, India.
Reetika MahajanProteomics Laboratory, Division of Plant Biotechnology, Sher-e-Kashmir University of Agricultural Sciences and Technology of Kashmir, Srinagar, India.
Sheikh MansoorDivision of Biochemistry, FBSc, Sher-e Kashmir University of Agricultural Sciences and Technology of Jammu, Jammu, India.
Sheezan RasoolProteomics Laboratory, Division of Plant Biotechnology, Sher-e-Kashmir University of Agricultural Sciences and Technology of Kashmir, Srinagar, India.
Rakeeb Ahmad MirDepartment of Biotechnology, BGSB University, Rajouri, India.
Ravinder SinghSchool of Biotechnology, Sher-e-Kashmir University of Agricultural Sciences and Technology of Jammu, Jammu, India.
Vandana ThakralNational Agr Food Biotechnology Institute (NABI), Mohali, India.
Virender KumarNational Agr Food Biotechnology Institute (NABI), Mohali, India.
Parvaze A SofiDivision of Genetics and Plant Breeding, Sher-e-Kashmir University of Agricultural Sciences and Technology of Kashmir, Srinagar, India.
Hamed A El-SerehyDepartment of Zoology, College of Science, King Saud University, Riyadh, Saudi Arabia.
Daniel Ingo HefftUniversity Centre Reaseheath, Reaseheath College, Nantwich, United Kingdom.
Sajad Majeed ZargarProteomics Laboratory, Division of Plant Biotechnology, Sher-e-Kashmir University of Agricultural Sciences and Technology of Kashmir, Srinagar, India.
Sher-e-Kashmir University of Agricultural Sciences and Technology of Kashmir · INNational Agri-Food Biotechnology Institute · INSher-e-Kashmir University of Agricultural Sciences and Technology of Jammu · INBaba Ghulam Shah Badshah University · INKing Saud University · SAReaseheath College · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Throughout the ages, the common bean has been consumed by humanity as an important food staple crop and source of nutrition on a global scale. Since its domestication, a wide spectrum of phenotypic and genotypic investigations have been carried out to unravel the potential of this crop and to understand the process of nutrient accumulation along with other desirable characteristics. The common bean is one of the essential legume crops due to its high protein and micronutrient content. The balance in micronutrients is critical for the growth and development of plants as well as humans. Iron (Fe), Zinc (Zn), Copper (Cu), Manganese (Mn), Magnesium (Mg), Calcium (Ca), and Molybdenum (Mo) are some of the important micronutrients present in legumes. Thus, we aimed to investigate the quantitative trait loci's (QTLs)/single nucleotide polymorphisms (SNPs) to identify the candidate genes associated with micronutrients through genotyping by sequencing (GBS). In our investigation, through GBS we identified SNPs linked with traits and assessed seven micronutrients in 96 selected common bean genotypes for screening nutritionally rich genotypes. Among 96399 SNPs total identified through GBS, 113 SNPs showed significant phenotypic variance, ranging from 13.50 to 21.74%. SNPs associated with most of the seed micronutrients (Mg, Mn, Fe, Ca, Cu) were found on chr3 & chr11 (Mg, Mn, Mo, Ca, Zn). The findings from this study could be used for haplotype-based selection of nutritionally rich genotypes and for marker-assisted genetic enhancement of the common bean. Further, the identified SNPs for candidate genes/transporters associated with micronutrient content may pave the way for the enrichment of seeds by employing genomics-assisted breeding programs.

Indexed as

common beangenome wide association studies (GWAS)ionomepopulation structuresingle nucleotide polymorphism (SNP)transporters

Identifiers

PMID35391791
PMCPMC8982075
OpenAlexW4221137436

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.