Evidence map›Paper›PMID 35389987›Full record

ArticlePLoS computational biology2022

Simulated actin reorganization mediated by motor proteins.

Maria-Veronica Ciocanel, Aravind Chandrasekaran, Carli Mager, Qin Ni, Garegin A Papoian, Adriana Dawes

Open access · goldAbstract read
In one paragraph

Article in PLoS computational biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.8field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Glycosylation Regulation by TMEM230 in Aging and Autoimmunity.International journal of molecular sciences · 2025
    Article
  3. Article
  4. On the Control of Directionality of Myosin.Journal of the American Chemical Society · 2024
    Article
  5. Article
  6. Modeling the dynamics of actin and myosin during bleb stabilization.bioRxiv : the preprint server for biology · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

Maria-Veronica CiocanelDepartment of Mathematics and Biology, Duke University, Durham, North Carolina, United States of America.ORCID 0000-0001-6859-4659
Aravind ChandrasekaranDepartment of Mechanical and Aerospace Engineering, University of California San Diego, La Jolla, California, United States of America.ORCID 0000-0003-2020-7220
Carli MagerDepartment of Biochemistry, The Ohio State University, Columbus, Ohio, United States of America.ORCID 0000-0002-1583-0168
Qin NiDepartment of Chemical and Biomolecular Engineering, University of Maryland, College Park, Maryland, United States of America.ORCID 0000-0002-0738-1817
Garegin A PapoianDepartment of Chemistry and Biochemistry and Institute for Physical Science and Technology, University of Maryland, College Park, Maryland, United States of America.ORCID 0000-0001-8580-3790
Adriana DawesDepartment of Mathematics and Department of Molecular Genetics, The Ohio State University, Columbus, Ohio, United States of America.ORCID 0000-0001-6055-2868
The Ohio State University · USUniversity of Maryland, College Park · USDuke University · USUniversity of California San Diego · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cortical actin networks are highly dynamic and play critical roles in shaping the mechanical properties of cells. The actin cytoskeleton undergoes significant reorganization in many different contexts, including during directed cell migration and over the course of the cell cycle, when cortical actin can transition between different configurations such as open patched meshworks, homogeneous distributions, and aligned bundles. Several types of myosin motor proteins, characterized by different kinetic parameters, have been involved in this reorganization of actin filaments. Given the limitations in studying the interactions of actin with myosin in vivo, we propose stochastic agent-based models and develop a set of data analysis measures to assess how myosin motor proteins mediate various actin organizations. In particular, we identify individual motor parameters, such as motor binding rate and step size, that generate actin networks with different levels of contractility and different patterns of myosin motor localization, which have previously been observed experimentally. In simulations where two motor populations with distinct kinetic parameters interact with the same actin network, we find that motors may act in a complementary way, by tuning the actin network organization, or in an antagonistic way, where one motor emerges as dominant. This modeling and data analysis framework also uncovers parameter regimes where spatial segregation between motor populations is achieved. By allowing for changes in kinetic rates during the actin-myosin dynamic simulations, our work suggests that certain actin-myosin organizations may require additional regulation beyond mediation by motor proteins in order to reconfigure the cytoskeleton network on experimentally-observed timescales.

Indexed as

ActinsMyosinsActin CytoskeletonCytoskeletonDyneinsKinesinsKineticsActinsDyneinsKinesinsMyosins

Identifiers

PMID35389987
PMCPMC9017880
OpenAlexW4224299365

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.