Evidence map›Paper›PMID 35389242›Full record

ArticleMicrobiology spectrum2022

Real-Life Feasibility of HIV Drug Resistance Testing Using Dried Filter Analytes in Kenyan Children and Adolescents Living with HIV.

Akarsh Manne, Alexander DeLong, Winstone Nyandiko, Allison K DeLong, Rachel Vreeman, Vladimir Novitsky, Anthony Ngeresa, Edwin Sang, Ashley Chory, Josephine Aluoch and 7 more

Open access · goldAbstract read
In one paragraph

Article in Microbiology spectrum, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.1field-weighted citation impact, top 59% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 4 institutions in 2 countries.

Akarsh Manne *Brown Universitygrid.40263.33, Providence, Rhode Island, USA.
Alexander DeLong *Brown Universitygrid.40263.33, Providence, Rhode Island, USA.
Winstone NyandikoAcademic Model Providing Access to Healthcare (AMPATH), Eldoret, Kenya.
Allison K DeLongBrown Universitygrid.40263.33, Providence, Rhode Island, USA.
Rachel VreemanAcademic Model Providing Access to Healthcare (AMPATH), Eldoret, Kenya.
Vladimir NovitskyBrown Universitygrid.40263.33, Providence, Rhode Island, USA.
Anthony NgeresaAcademic Model Providing Access to Healthcare (AMPATH), Eldoret, Kenya.
Edwin SangAcademic Model Providing Access to Healthcare (AMPATH), Eldoret, Kenya.
Ashley ChoryIcahn School of Medicine at Mount Sinaigrid.59734.3c, New York, New York, USA.
Josephine AluochAcademic Model Providing Access to Healthcare (AMPATH), Eldoret, Kenya.
Eslyne JepkemboiAcademic Model Providing Access to Healthcare (AMPATH), Eldoret, Kenya.
Millicent OridoAcademic Model Providing Access to Healthcare (AMPATH), Eldoret, Kenya.
Celestine AshimosiAcademic Model Providing Access to Healthcare (AMPATH), Eldoret, Kenya.
Festus SangAcademic Model Providing Access to Healthcare (AMPATH), Eldoret, Kenya.
Joseph W HoganBrown Universitygrid.40263.33, Providence, Rhode Island, USA.
Rami KantorBrown Universitygrid.40263.33, Providence, Rhode Island, USA.ORCID 0000-0003-3659-1108
RESPECT (Resistance in a Pediatric Cohort) Study
AMPATH · KEBrown University · USIcahn School of Medicine at Mount Sinai · USMoi University · KE

Funding

Translational ScienceP30AI042853 · NIAID · MIRIAM HOSPITAL · PI CURT G BECKWITH, DEBBIE M. CHENG · 1998 to 2026
$51.7M
HIV Treatment Failure and Drug Resistance in Western Kenyan ChildrenR01AI120792 · NIAID · INDIANA UNIVERSITY INDIANAPOLIS · PI KANTOR, RAMI, VREEMAN, RACHEL CHRISTINE · 2016 to 2019
$2.9M
HIV Drug Resistance, Monitoring and TransmissionK24AI134359 · NIAID · MIRIAM HOSPITAL · PI Rami Kantor · 2018 to 2026
$1.3M
NIAID NIH HHS K24 AI134359NIAID NIH HHS P30 AI042853NIAID NIH HHS R01 AI120792
6 · The paper itself

Abstract

HIV-1 drug resistance remains a global challenge, yet access to testing is limited, particularly in resource-limited settings. We examined feasibility and limitations of genotyping using dried filter analytes in treatment-experienced Kenyan youth with HIV. Youth infected with HIV perinatally were enrolled in 2016-2018 at the Academic Model Providing Access to Healthcare in Eldoret, western Kenya. Samples were shipped in real-time at ambient temperature to the US, and those with viral load (VL)>1,000 copies/mL were tested based on convenience. Dried blood spots genotyping was attempted when unsuccessful from Hemaspots. Multiple logistic regression was used to examine predictors of genotyping success. Samples from 49 participants (median age 15 years, 43% female, median CD4 496 cells/μL [18%], median 8 years on therapy, median VL 11,827 copies/mL) were shipped after median 7 days from collection, arrived in 20 shipments after median 5 days, and extracted after median 2 days (1 day for samples processed on arrival; and 42 days for frozen Hemaspots). Overall, 29/49 (59%) samples with VL > 1,000 copies/mL and 25/32 (78%) with VL > 5,000 copies/mL were genotyped by either Hemaspots or DBS. Successful genotyping was associated with higher Hemaspot volume and higher VL. Real-life HIV-1 drug resistance testing from dried filter analytes is feasible, even in settings with constrained resources. Findings, particularly relevant where resistance testing is limited for clinical care, raise awareness to implementation practicability of this guidelines-recommended test in care of more individuals and populations. Further optimization of filter analytes is needed to overcome related challenges.

Indexed as

HIV-1HIV InfectionsAdolescentChildChild, PreschoolDrug Resistance, ViralFeasibility StudiesFemaleHumansKenyaMaleViral Loaddried blood spotsdried filter analytesdrug resistancehemaspotsHIVKenyaresource limited settingsyouth with HIV

Identifiers

PMID35389242
PMCPMC9045389
OpenAlexW4225097382

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.