Evidence map›Paper›PMID 35389240›Full record

ArticleMicrobiology spectrum2022

Whole-Genome Sequencing-Based Re-Identification of

Mari Tohya, Kanae Teramoto, Shin Watanabe, Tomomi Hishinuma, Masahito Shimojima, Miho Ogawa, Tatsuya Tada, Yoko Tabe, Teruo Kirikae

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Microbiology spectrum, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Beyond the Usual Suspects: EmergingInternational journal of molecular sciences · 2026
    Review
  3. Article
  4. Article
  5. Article
  6. First report of a urinaryFrontiers in microbiology · 2026
    Article
  7. Genomic characterization and niche adaptive analysis ofFrontiers in cellular and infection microbiology · 2026
    Article
  8. Characterization ofReports (MDPI) · 2025
    Article
  9. Article
  10. Phylogenomics of novel clones ofMicrobiology spectrum · 2024
    Article
  11. Review
  12. Draft genome sequencing of multidrug-resistantMicrobiology resource announcements · 2024
    Article
  13. Draft genome sequencing of multidrug-resistantMicrobiology resource announcements · 2024
    Article
  14. Identification ofHeliyon · 2024
    Article
  15. Article
  16. Review
  17. The multidrug-resistantFrontiers in microbiology · 2023
    Article
  18. Identification ofFrontiers in cellular and infection microbiology · 2022
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Mari TohyaDepartment of Microbiology, Juntendo Universitygrid.258269.2 School of Medicine, Tokyo, Japan.
Kanae TeramotoKoichi Tanaka Mass Spectrometry Research Laboratory, Kyoto, Japan.
Shin WatanabeDepartment of Microbiome Research, Juntendo Universitygrid.258269.2 School of Medicine, Tokyo, Japan.
Tomomi HishinumaDepartment of Microbiology, Juntendo Universitygrid.258269.2 School of Medicine, Tokyo, Japan.
Masahito ShimojimaSUGIYAMA-GEN Co., Ltd., Tokyo, Japan.
Miho OgawaBML, Inc., Saitama, Japan.
Tatsuya TadaDepartment of Microbiology, Juntendo Universitygrid.258269.2 School of Medicine, Tokyo, Japan.
Yoko TabeDepartment of Clinical Laboratory Medicine, Juntendo Universitygrid.258269.2 Graduate School of Medicine, Tokyo, Japan.
Teruo KirikaeDepartment of Microbiology, Juntendo Universitygrid.258269.2 School of Medicine, Tokyo, Japan.ORCID 0000-0001-7114-769X
Juntendo University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The genus Pseudomonas, a complex Gram-negative genus, includes species isolated from various environments, plants, animals, and humans. We compared whole-genome sequencing (WGS) with clinical bacteriological methods and evaluated matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF MS) to identify Pseudomonas species. Clinical isolates (

Indexed as

Pseudomonas fluorescensPseudomonas putidaAnimalsBacteriological TechniquesSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationWhole Genome Sequencinghuman pathogenMALDI-TOF MSPseudomonasre-identificationwhole-genome sequencing

Identifiers

PMID35389240
PMCPMC9045174
OpenAlexW4225097397

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.