Evidence map›Paper›PMID 35389128›Full record

ArticleJournal of biomolecular NMR2022

Fundamental and practical aspects of machine learning for the peak picking of biomolecular NMR spectra.

Da-Wei Li, Alexandar L Hansen, Lei Bruschweiler-Li, Chunhua Yuan, Rafael Brüschweiler

Abstract read
In one paragraph

Article in Journal of biomolecular NMR, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Article
  3. The Evolving Landscape of NMR Structural Elucidation.Molecules (Basel, Switzerland) · 2026
    Review
  4. Advancing Structure Elucidation with a Flexible Multi-Spectral AI Model.Angewandte Chemie (International ed. in English) · 2026
    Article
  5. Review
  6. Machine learning ofScientific reports · 2025
    Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Review
  12. Article
  13. NMR-based metabolomics: Where are we now and where are we going?Progress in nuclear magnetic resonance spectroscopy
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Da-Wei LiCampus Chemical Instrument Center, The Ohio State University, Columbus, OH, 43210, USA. lidawei@gmail.com.
Alexandar L HansenCampus Chemical Instrument Center, The Ohio State University, Columbus, OH, 43210, USA.
Lei Bruschweiler-LiCampus Chemical Instrument Center, The Ohio State University, Columbus, OH, 43210, USA.
Chunhua YuanCampus Chemical Instrument Center, The Ohio State University, Columbus, OH, 43210, USA.
Rafael BrüschweilerCampus Chemical Instrument Center, The Ohio State University, Columbus, OH, 43210, USA. bruschweiler.1@osu.edu.ORCID http://orcid.org/0000-0003-3649-4543

Funding

Advanced NMR, computational, and hybrid methods for metabolomicsR35GM139482 · NIGMS · OHIO STATE UNIVERSITY · PI BRUSCHWEILER, RAFAEL · 2021 to 2025
$1.9M
Directorate for Biological Sciences MCB-2103637NIGMS NIH HHS GM139482NIGMS NIH HHS R35 GM139482
6 · The paper itself

Abstract

Rapid progress in machine learning offers new opportunities for the automated analysis of multidimensional NMR spectra ranging from protein NMR to metabolomics applications. Most recently, it has been demonstrated how deep neural networks (DNN) designed for spectral peak picking are capable of deconvoluting highly crowded NMR spectra rivaling the facilities of human experts. Superior DNN-based peak picking is one of a series of critical steps during NMR spectral processing, analysis, and interpretation where machine learning is expected to have a major impact. In this perspective, we lay out some of the unique strengths as well as challenges of machine learning approaches in this new era of automated NMR spectral analysis. Such a discussion seems timely and should help define common goals for the NMR community, the sharing of software tools, standardization of protocols, and calibrate expectations. It will also help prepare for an NMR future where machine learning and artificial intelligence tools will be common place.

Indexed as

AlgorithmsArtificial IntelligenceHumansMachine LearningNuclear Magnetic Resonance, BiomolecularSoftwareDeep learningDeep neural networkMachine learningNMR spectroscopyPeak pickingSpectral analysis

Identifiers

PMID35389128
PMCPMC9246764

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.