Evidence map›Paper›PMID 35388904›Full record

ArticlePathogens and disease2022

Expression and structure of the Chlamydia trachomatis DksA ortholog.

Cameron Mandel, Hong Yang, Garry W Buchko, Jan Abendroth, Nicole Grieshaber, Travis Chiarelli, Scott Grieshaber, Anders Omsland

Open access · hybridAbstract read
In one paragraph

Article in Pathogens and disease, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
  3. Metabolism and physiology of pathogenic bacterial obligate intracellular parasites.Frontiers in cellular and infection microbiology · 2024
    Review
  4. Molecular pathogenesis ofFrontiers in cellular and infection microbiology · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Cameron MandelPaul G. Allen School for Global Health, Washington State University, Pullman, WA 99164, USA.
Hong YangPaul G. Allen School for Global Health, Washington State University, Pullman, WA 99164, USA.
Garry W BuchkoSchool of Molecular Biosciences, Washington State University, Pullman, WA 99164, USA.
Jan AbendrothSeattle Structural Genomics Center for Infectious Disease, WA, USA.
Nicole GrieshaberDepartment of Biological Sciences, University of Idaho, Moscow, ID 83844, USA.
Travis ChiarelliDepartment of Biological Sciences, University of Idaho, Moscow, ID 83844, USA.
Scott GrieshaberDepartment of Biological Sciences, University of Idaho, Moscow, ID 83844, USA.
Anders OmslandPaul G. Allen School for Global Health, Washington State University, Pullman, WA 99164, USA.ORCID 0000-0001-5868-0414
University of Idaho · USWashington State University · USPacific Northwest National Laboratory · USVirginia Mason Bainbridge Island Medical Center · US

Funding

Infectious Diseases and Microbial Immunology Training ProgramT32AI007025 · NIAID · WASHINGTON STATE UNIVERSITY · PI Thomas H KAWULA, M KARIUKI NJENGA · 1985 to 2026
$7.4M
Genetic Regulation of Developmental Transitions in ChlamydiaR01AI130072 · NIAID · WASHINGTON STATE UNIVERSITY · PI GRIESHABER, SCOTT S, OMSLAND, ANDERS · 2018 to 2021
$2.3M
Regulation of Chlamydia trachomatis development via the stringent responseR21AI115244 · NIAID · WASHINGTON STATE UNIVERSITY · PI OMSLAND, ANDERS · 2015 to 2016
$407k
NIAID NIH HHS HHSN272201700059CNIAID NIH HHS R01 AI130072NIAID NIH HHS R21 AI115244NIAID NIH HHS T32 AI007025
6 · The paper itself

Abstract

Chlamydia trachomatis is a bacterial obligate intracellular parasite and a significant cause of human disease, including sexually transmitted infections and trachoma. The bacterial RNA polymerase-binding protein DksA is a transcription factor integral to the multicomponent bacterial stress response pathway known as the stringent response. The genome of C. trachomatis encodes a DksA ortholog (DksACt) that is maximally expressed at 15-20 h post infection, a time frame correlating with the onset of transition between the replicative reticulate body (RB) and infectious elementary body (EB) forms of the pathogen. Ectopic overexpression of DksACt in C. trachomatis prior to RB-EB transitions during infection of HeLa cells resulted in a 39.3% reduction in overall replication (yield) and a 49.6% reduction in recovered EBs. While the overall domain organization of DksACt is similar to the DksA ortholog of Escherichia coli (DksAEc), DksACt did not functionally complement DksAEc. Transcription of dksACt is regulated by tandem promoters, one of which also controls expression of nrdR, encoding a negative regulator of deoxyribonucleotide biosynthesis. The phenotype resulting from ectopic expression of DksACt and the correlation between dksACt and nrdR expression is consistent with a role for DksACt in the C. trachomatis developmental cycle.

Indexed as

Chlamydia InfectionsEscherichia coli ProteinsBacterial ProteinsChlamydia trachomatisEscherichia coliGene Expression Regulation, BacterialHeLa CellsHumansBacterial ProteinsdksA protein, E coliEscherichia coli ProteinsChlamydiamorphological transitionriboswitchtranscription

Identifiers

PMID35388904
PMCPMC9126822
OpenAlexW4225361066

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.