Evidence map›Paper›PMID 35385527›Full record

ArticlePloS one2022

Mutations in the acetylation hotspots of Rbl2 are associated with increased risk of breast cancer.

Farman Ullah, Nadia Khurshid, Qaiser Fatimi, Peter Loidl, Muhammad Saeed

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Farman UllahDepartment of Biosciences, Cancer Genetics & Epigenetics Lab, COMSATS University Islamabad (CUI), Islamabad, Pakistan.
Nadia KhurshidDepartment of Biosciences, Cancer Genetics & Epigenetics Lab, COMSATS University Islamabad (CUI), Islamabad, Pakistan.
Qaiser FatimiDepartment of Biosciences, Cancer Genetics & Epigenetics Lab, COMSATS University Islamabad (CUI), Islamabad, Pakistan.
Peter LoidlInstitute of Molecular Biology, Innsbruck Medical University, Innsbruck, Austria.
Muhammad SaeedDepartment of Biosciences, Cancer Genetics & Epigenetics Lab, COMSATS University Islamabad (CUI), Islamabad, Pakistan.ORCID 0000-0002-5998-787X
COMSATS University Islamabad · PKInnsbruck Medical University · AT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Retinoblastoma like protein-2 (Rbl2) is functionally regulated by phosphorylation and acetylation. Previously, we demonstrated that lysine K1083 (K1079 in human Rbl2) is a potential target for acetylation but its functional role remains elusive. We investigated alterations in human Rbl2 gene specifically targeting exons 19-22 harbouring acetylatable residues i.e. K1072, K1083 and K1115 through single stranded conformation polymorphism (SSCP) in breast cancer patients. The K1083 was found altered into arginine (R) in 51% of the cases but K1072 and K1115 remained conserved. The 'K1083R' mutation impairs the acetylation potential of this motif that may result in functional inactivation of Rbl2. These patients also showed poor survival outcome that highlights prognostic relevance of this residue. NIH3T3 cells expressing glutamine (K1083Q) mutated Rbl2 could not be arrested in G1 by serum starvation, whereas cells expressing Rbl2 with K1083R showed prolonged G1 arrest in fluorescence activated cell sorting (FACS) analysis. This suggests that K1083 acetylation is important for G1/S transition. Further, we performed molecular dynamic simulations (MDS) to analyse kinetics of residue K1083 with Cyc-D1/CDK4. Mutations at K1083 impaired this binding exposing neighbouring residues S1080, P1081, S1082 and R1084, hence enhancing the possibility of accelerated phosphorylation. S1080 has previously been reported as a promising candidate of cell cycle dependent phosphorylation in Rbl2. This highlights significance of mutations in the pocket domain of Rbl2 gene in breast cancer, and also strengthen the supposition that K1083 acetylation is pre-requisite for its phosphorylation.

Indexed as

Breast NeoplasmsRetinoblastoma-Like Protein p130AcetylationAnimalsFemaleHumansMiceMutationNIH 3T3 CellsRBL2 protein, humanRetinoblastoma-Like Protein p130

Identifiers

PMID35385527
PMCPMC8985964
OpenAlexW4226257471

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.