Evidence map›Paper›PMID 35385078›Full record

ArticlePlant physiology2022

Silencing the conserved small nuclear ribonucleoprotein SmD1 target gene alters susceptibility to root-knot nematodes in plants.

Joffrey Mejias, Yongpan Chen, Jérémie Bazin, Nhat-My Truong, Karine Mulet, Yara Noureddine, Stéphanie Jaubert-Possamai, Sarah Ranty-Roby, Salomé Soulé, Pierre Abad and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
5.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 29 citations in OpenAlex.

  1. Toward sustainable control of phyto-nematodes: integrating lessons from crops to advance genetic modification in tomato.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
    Review
  2. Review
  3. Article
  4. Functional Characterization ofInternational journal of molecular sciences · 2025
    Article
  5. Article
  6. Article
  7. Review
  8. Review
  9. Article
  10. The Regulatory Network of Sweet Corn (International journal of molecular sciences · 2023
    Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 1 institution in 2 countries.

Joffrey MejiasINRAE, Université Côte d'Azur, CNRS, ISA, F-06903 Sophia Antipolis, France.
Yongpan ChenINRAE, Université Côte d'Azur, CNRS, ISA, F-06903 Sophia Antipolis, France.ORCID 0000-0001-9074-7199
Jérémie BazinInstitute of Plant Sciences Paris-Saclay (IPS2), CNRS, INRA, Universités Paris Saclay, Evry, Université de Paris, 91192 Gif sur Yvette, France.
Nhat-My TruongINRAE, Université Côte d'Azur, CNRS, ISA, F-06903 Sophia Antipolis, France.ORCID 0000-0003-2436-7897
Karine MuletINRAE, Université Côte d'Azur, CNRS, ISA, F-06903 Sophia Antipolis, France.
Yara NoureddineINRAE, Université Côte d'Azur, CNRS, ISA, F-06903 Sophia Antipolis, France.ORCID 0000-0002-6875-5835
Stéphanie Jaubert-PossamaiINRAE, Université Côte d'Azur, CNRS, ISA, F-06903 Sophia Antipolis, France.ORCID 0000-0002-3518-727X
Sarah Ranty-RobyINRAE, Université Côte d'Azur, CNRS, ISA, F-06903 Sophia Antipolis, France.ORCID 0000-0001-7817-1369
Salomé SouléINRAE, Université Côte d'Azur, CNRS, ISA, F-06903 Sophia Antipolis, France.ORCID 0000-0002-0122-5020
Pierre AbadINRAE, Université Côte d'Azur, CNRS, ISA, F-06903 Sophia Antipolis, France.
Martin D CrespiInstitute of Plant Sciences Paris-Saclay (IPS2), CNRS, INRA, Universités Paris Saclay, Evry, Université de Paris, 91192 Gif sur Yvette, France.ORCID 0000-0002-5698-9482
Bruno FaveryINRAE, Université Côte d'Azur, CNRS, ISA, F-06903 Sophia Antipolis, France.ORCID 0000-0003-3323-1852
Michaël QuentinINRAE, Université Côte d'Azur, CNRS, ISA, F-06903 Sophia Antipolis, France.ORCID 0000-0002-8030-1203
Centre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Root-knot nematodes (RKNs) are among the most damaging pests of agricultural crops. Meloidogyne is an extremely polyphagous genus of nematodes that can infect thousands of plant species. A few genes for resistance (R-genes) to RKN suitable for use in crop breeding have been identified, but virulent strains and species of RKN have emerged that render these R-genes ineffective. Secretion of RKN effectors targeting plant functions mediates the reprogramming of root cells into specialized feeding cells, the giant cells, essential for RKN development and reproduction. Conserved targets among plant species define the more relevant strategies for controlling nematode infection. The EFFECTOR18 (EFF18) protein from M. incognita interacts with the spliceosomal small nuclear ribonucleoprotein D1 (SmD1) in Arabidopsis (Arabidopsis thaliana), disrupting its function in alternative splicing regulation and modulating the giant cell transcriptome. We show here that EFF18 is a conserved RKN-specific effector that targets this conserved spliceosomal SmD1 protein in Solanaceae. This interaction modulates alternative splicing events produced by tomato (Solanum lycopersicum) in response to M. incognita infection. The alteration of SmD1 expression by virus-induced gene silencing in Solanaceae affects giant cell formation and nematode development. Thus, our work defines a promising conserved SmD1 target gene to develop broad resistance for the control of Meloidogyne spp. in plants.

Indexed as

ArabidopsisSolanum lycopersicumTylenchoideaAnimalsCrops, AgriculturalHost-Parasite InteractionsPlant BreedingPlant DiseasesPlant RootsRibonucleoproteins, Small NuclearRibonucleoproteins, Small Nuclear

Identifiers

PMID35385078
PMCPMC9237699
OpenAlexW4225764854

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.