Evidence map›Paper›PMID 35384696›Full record

ArticlemSystems2022

Absolute Proteome Quantification in the Gas-Fermenting Acetogen

Kaspar Valgepea, Gert Talbo, Nobuaki Takemori, Ayako Takemori, Christina Ludwig, Vishnuvardhan Mahamkali, Alexander P Mueller, Ryan Tappel, Michael Köpke, Séan Dennis Simpson and 2 more

Open access · goldAbstract read
In one paragraph

Article in mSystems, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.0field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. HBiotechnology and bioengineering · 2025
    Article
  7. Article
  8. Article
  9. Article
  10. Shu: visualization of high-dimensional biological pathways.Bioinformatics (Oxford, England) · 2024
    Article
  11. Review
  12. Article
  13. Genome-wide CRISPRi screen identifies enhanced autolithotrophic phenotypes in acetogenic bacteriumProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  14. Enzyme-constrained metabolic model andComputational and structural biotechnology journal · 2023
    Article
  15. Deletion of genes linked to the CFrontiers in bioengineering and biotechnology · 2023
    Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 5 countries.

Kaspar ValgepeaAustralian Institute for Bioengineering and Nanotechnology (AIBN), The University of Queenslandgrid.1003.2, St. Lucia, Australia.ORCID 0000-0003-4803-7569
Gert TalboAustralian Institute for Bioengineering and Nanotechnology (AIBN), The University of Queenslandgrid.1003.2, St. Lucia, Australia.
Nobuaki TakemoriInstitute for Promotion of Science and Technology, Ehime University, Ehime, Japan.
Ayako TakemoriInstitute for Promotion of Science and Technology, Ehime University, Ehime, Japan.
Christina LudwigBavarian Center for Biomolecular Mass Spectrometry (BayBioMS), Technical University of Munich, Freising, Germany.
Vishnuvardhan MahamkaliLanzaTech Inc., Skokie, Illinois, USA.
Alexander P MuellerLanzaTech Inc., Skokie, Illinois, USA.
Ryan TappelLanzaTech Inc., Skokie, Illinois, USA.
Michael KöpkeLanzaTech Inc., Skokie, Illinois, USA.
Séan Dennis SimpsonLanzaTech Inc., Skokie, Illinois, USA.
Lars Keld NielsenAustralian Institute for Bioengineering and Nanotechnology (AIBN), The University of Queenslandgrid.1003.2, St. Lucia, Australia.
Esteban MarcellinAustralian Institute for Bioengineering and Nanotechnology (AIBN), The University of Queenslandgrid.1003.2, St. Lucia, Australia.
The University of Queensland · AUEhime University · JPTechnical University of Munich · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microbes that can recycle one-carbon (C

Indexed as

Carbon DioxideProteomeCarbonCarbon MonoxideClostridiumEthanolGasesProteomicsCarbonCarbon DioxideCarbon MonoxideEthanolGasesProteomeacetogengas fermentationgenome-scale metabolic modelingmetabolic modelingmetabolomicsproteomics

Identifiers

PMID35384696
PMCPMC9040625
OpenAlexW4226220327

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.