Evidence map›Paper›PMID 35383222›Full record

ArticleScientific reports2022

Screening and validation of reference genes for qRT-PCR of bovine skeletal muscle-derived satellite cells.

Guo-Hua Wang, Cheng-Cheng Liang, Bing-Zhi Li, Xin-Ze Du, Wen-Zhen Zhang, Gong Cheng, Lin-Sen Zan

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Guo-Hua Wang *College of Animal Science and Technology, Northwest A&F University, Yangling, 712100, Shaanxi, China.
Cheng-Cheng Liang *College of Animal Science and Technology, Northwest A&F University, Yangling, 712100, Shaanxi, China.
Bing-Zhi LiCollege of Animal Science and Technology, Northwest A&F University, Yangling, 712100, Shaanxi, China.
Xin-Ze DuCollege of Animal Science and Technology, Northwest A&F University, Yangling, 712100, Shaanxi, China.
Wen-Zhen ZhangCollege of Animal Science and Technology, Northwest A&F University, Yangling, 712100, Shaanxi, China.
Gong ChengCollege of Animal Science and Technology, Northwest A&F University, Yangling, 712100, Shaanxi, China.
Lin-Sen ZanCollege of Animal Science and Technology, Northwest A&F University, Yangling, 712100, Shaanxi, China. zanlinsen@163.com.
Northwest A&F University · CNNational Beef Cattle Industrial Technology System · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The accuracy of sixteen commonly used internal reference genes was assessed in skeletal muscle-derived satellite cells of Qinchuan cattle at different stages of proliferation and induction of differentiation to determine the most suitable ones. Quantitative real-time PCR and three commonly used algorithmic programs, GeNorm, NormFinder and BestKeeper, were used to evaluate the stability of expression of the candidate internal reference genes (GAPDH, ACTB, PPIA, LRP10, HPRT1, YWHAZ, B2M, TBP, EIF3K , RPS9, UXT, 18S rRNA, RPLP0, MARVELD, EMD and RPS15A) in skeletal muscle-derived satellite cells at 0, 12, 24, 36 and 48 h of growth and after differentiation for 0, 2, 4, 6 and 8 days. The expression of two satellite cell marker genes, CCNA2 and MYF5, was used for validation analysis. The results of the software analyses showed that GAPDH and RPS15A were the most stable reference gene combinations during in vitro proliferation of bovine skeletal muscle-derived satellite cells, RPS15A and RPS9 were the most stable reference gene combinations during in vitro induction of differentiation of the cells, and PPIA was the least stable reference gene during proliferation and differentiation and was not recommended. This study lays the foundation for the selection of reference genes for qRT-PCR during the proliferation and induction of differentiation of bovine skeletal muscle-derived satellite cells.

Indexed as

Genes, EssentialSoftwareAnimalsCattleGene Expression ProfilingMuscle, SkeletalReal-Time Polymerase Chain ReactionReference StandardsReverse Transcriptase Polymerase Chain Reaction

Identifiers

PMID35383222
PMCPMC8983775
OpenAlexW4223624316

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.