Evidence map›Paper›PMID 35383179›Full record

ArticleScientific data2022

Proteome metabolome and transcriptome data for three Symbiodiniaceae under ambient and heat stress conditions.

Emma F Camp, Tim Kahlke, Brandon Signal, Clinton A Oakley, Adrian Lutz, Simon K Davy, David J Suggett, William P Leggat

Abstract readDataset
In one paragraph

Article in Scientific data, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

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  15. The gastrodin biosynthetic pathway inFrontiers in plant science · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Emma F CampClimate Change Cluster, University of Technology Sydney, Sydney, Australia. Emma.Camp@uts.edu.au.ORCID 0000-0003-1962-1336
Tim KahlkeClimate Change Cluster, University of Technology Sydney, Sydney, Australia.
Brandon SignalSchool of Medicine, College of Health and Medicine, University of Tasmania, Hobart, Australia.
Clinton A OakleySchool of Biological Sciences, Victoria University of Wellington, Wellington, New Zealand.ORCID 0000-0002-4673-0645
Adrian LutzMetabolomics Australia, Bio21 Institute, The University of Melbourne, Parkville, Australia.ORCID 0000-0002-8392-3921
Simon K DavySchool of Biological Sciences, Victoria University of Wellington, Wellington, New Zealand.ORCID 0000-0003-3584-5356
David J SuggettClimate Change Cluster, University of Technology Sydney, Sydney, Australia.ORCID 0000-0001-5326-2520
William P LeggatSchool of Environmental and Life Sciences, University of Newcastle, Callaghan, Australia.ORCID 0000-0003-4148-2555

Funding

Department of Education and Training | Australian Research Council (ARC) DE190100142Department of Education and Training | Australian Research Council (ARC) DP160100271
6 · The paper itself

Abstract

The Symbiodiniaceae are a taxonomically and functionally diverse family of marine dinoflagellates. Their symbiotic relationship with invertebrates such as scleractinian corals has made them the focus of decades of research to resolve the underlying biology regulating their sensitivity to stressors, particularly thermal stress. Research to-date suggests that Symbiodiniaceae stress sensitivity is governed by a complex interplay between phylogenetic dependent and independent traits (diversity of characteristics of a species). Consequently, there is a need for datasets that simultaneously broadly resolve molecular and physiological processes under stressed and non-stressed conditions. Therefore, we provide a dataset simultaneously generating transcriptome, metabolome, and proteome data for three ecologically important Symbiodiniaceae isolates under nutrient replete growth conditions and two temperature treatments (ca. 26 °C and 32 °C). Elevated sea surface temperature is primarily responsible for coral bleaching events that occur when the coral-Symbiodiniaceae relationship has been disrupted. Symbiodiniaceae can strongly influence their host's response to thermal stress and consequently it is necessary to resolve drivers of Symbiodiniaceae heat stress tolerance. We anticipate these datasets to expand our understanding on the key genotypic and functional properties that influence the sensitivities of Symbiodiniaceae to thermal stress.

Indexed as

AnthozoaDinoflagellidaAnimalsHeat-Shock ResponseMetabolomePhylogenyProteomeSymbiosisTranscriptomeProteome

Identifiers

PMID35383179
PMCPMC8983644

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.