Evidence map›Paper›PMID 35382930›Full record

ArticleBiological psychiatry2022

Robust, Generalizable, and Interpretable Artificial Intelligence-Derived Brain Fingerprints of Autism and Social Communication Symptom Severity.

Kaustubh Supekar, Srikanth Ryali, Rui Yuan, Devinder Kumar, Carlo de Los Angeles, Vinod Menon

Open access · greenAbstract read
In one paragraph

Article in Biological psychiatry, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 1 pooled it
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 1 synthesis or guideline pooled it, 35 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Kaustubh SupekarDepartment of Psychiatry and Behavioral Sciences, Stanford University School of Medicine, Stanford, California. Electronic address: ksupekar@stanford.edu.
Srikanth RyaliDepartment of Psychiatry and Behavioral Sciences, Stanford University School of Medicine, Stanford, California.
Rui YuanDepartment of Psychiatry and Behavioral Sciences, Stanford University School of Medicine, Stanford, California.
Devinder KumarDepartment of Psychiatry and Behavioral Sciences, Stanford University School of Medicine, Stanford, California.
Carlo de Los AngelesDepartment of Psychiatry and Behavioral Sciences, Stanford University School of Medicine, Stanford, California.
Vinod MenonDepartment of Psychiatry and Behavioral Sciences, Stanford University School of Medicine, Stanford, California; Department of Neurology & Neurological Sciences, Stanford University School of Medicine, Stanford, California; Stanford Neurosciences Institute, Stanford University School of Medicine, Stanford, California. Electronic address: menon@stanford.edu.
Stanford University · US

Funding

Mathematical Cognition in Autism: A Cognitive and Systems Neuroscience ApproachR01MH084164 · NIMH · STANFORD UNIVERSITY · PI MENON, VINOD · 2011 to 2021
$6.7M
Integrative computational models of latent behavioral and neural constructs in children: a longitudinal developmental big-data approachR01MH121069 · NIMH · STANFORD UNIVERSITY · PI MENON, VINOD · 2019 to 2023
$3.9M
Novel Bayesian linear dynamical systems-based methods for discovering human brain circuit dynamics in health and diseaseR01EB022907 · NIBIB · STANFORD UNIVERSITY · PI MENON, VINOD · 2016 to 2018
$1.6M
Methods for Dynamic Causal Interactions in the Developing Human BrainK25HD074652 · NICHD · STANFORD UNIVERSITY · PI RYALI, SRIKANTH · 2013 to 2019
$663k
Identification of Brain Circuit Markers for Psychosis in Alzheimer's Disease by Leveraging Big Data and Machine LearningR21AG072114 · NIA · STANFORD UNIVERSITY · PI SUPEKAR, KAUSTUBH SATYENDRA · 2021 to 2022
$433k
NIA NIH HHS R21 AG072114NIBIB NIH HHS R01 EB022907NICHD NIH HHS K25 HD074652NIMH NIH HHS R01 MH084164NIMH NIH HHS R01 MH121069
6 · The paper itself

Abstract

backgroundAutism spectrum disorder (ASD) is among the most pervasive neurodevelopmental disorders, yet the neurobiology of ASD is still poorly understood because inconsistent findings from underpowered individual studies preclude the identification of robust and interpretable neurobiological markers and predictors of clinical symptoms.

methodsWe leverage multiple brain imaging cohorts and exciting recent advances in explainable artificial intelligence to develop a novel spatiotemporal deep neural network (stDNN) model, which identifies robust and interpretable dynamic brain markers that distinguish ASD from neurotypical control subjects and predict clinical symptom severity.

resultsstDNN achieved consistently high classification accuracies in cross-validation analysis of data from the multisite ABIDE (Autism Brain Imaging Data Exchange) cohort (n = 834). Crucially, stDNN also accurately classified data from independent Stanford (n = 202) and GENDAAR (Gender Exploration of Neurogenetics and Development to Advanced Autism Research) (n = 90) cohorts without additional training. stDNN could not distinguish attention-deficit/hyperactivity disorder from neurotypical control subjects, highlighting the model's specificity. Explainable artificial intelligence revealed that brain features associated with the posterior cingulate cortex and precuneus, dorsolateral and ventrolateral prefrontal cortex, and superior temporal sulcus, which anchor the default mode network, cognitive control, and human voice processing systems, respectively, most clearly distinguished ASD from neurotypical control subjects in the three cohorts. Furthermore, features associated with the posterior cingulate cortex and precuneus nodes of the default mode network emerged as robust predictors of the severity of core social and communication deficits but not restricted/repetitive behaviors in ASD.

conclusionsOur findings, replicated across independent cohorts, reveal robust individualized functional brain fingerprints of ASD psychopathology, which could lead to more objective and precise phenotypic characterization and targeted treatments.

Indexed as

Autism Spectrum DisorderAutistic DisorderArtificial IntelligenceBrainBrain MappingCommunicationHumansMagnetic Resonance ImagingNeural PathwaysAutismBiomarkersClinical heterogeneityDefault mode networkExplainable artificial intelligenceReproducible science

Identifiers

PMID35382930
PMCPMC9378793
OpenAlexW4212997257

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.