Evidence map›Paper›PMID 35382733›Full record

ArticleBMC plant biology2022

Genome-scale transcriptomic insights into the gene co-expression network of seed abortion in triploid Siraitia grosvenorii.

Rongchang Wei, Dongping Tu, Xiyang Huang, Zuliang Luo, Xiaohua Huang, Nan Cui, Juan Xu, Faqian Xiong, Haifeng Yan, Xiaojun Ma

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.6field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 6 citations in OpenAlex.

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  6. Light and Potassium Improve the Quality ofMolecules (Basel, Switzerland) · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 1 country.

Rongchang Wei *Cash Crops Research Institute, Guangxi Academy of Agricultural Sciences, Nanning, 530007, China.
Dongping Tu *Guangxi University of Chinese Medicine, Nanning, 530020, China.
Xiyang Huang *Guangxi Institute of Botany, Guangxi Zhuang Autonomous Region and Chinese Academy of Sciences, Guangxi Key Laboratory of Plant Functional Phytochemicals Research and Sustainable Utilization, Guilin, 541006, China.
Zuliang LuoInstitute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing, 100193, China.
Xiaohua HuangCash Crops Research Institute, Guangxi Academy of Agricultural Sciences, Nanning, 530007, China.
Nan CuiGuangxi Institute of Botany, Guangxi Zhuang Autonomous Region and Chinese Academy of Sciences, Guangxi Key Laboratory of Plant Functional Phytochemicals Research and Sustainable Utilization, Guilin, 541006, China.
Juan XuBiotechnology Research Institute, Guangxi Academy of Agricultural Sciences, Nanning, 530007, China.
Faqian XiongCash Crops Research Institute, Guangxi Academy of Agricultural Sciences, Nanning, 530007, China. xfq2002@126.com.
Haifeng YanSugarcane Research Institute, Guangxi Academy of Agricultural Sciences, Nanning, 530007, China. gstsyhf@163.com.
Xiaojun MaInstitute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing, 100193, China. mayixuan10@163.com.
Guangxi Academy of Agricultural Science · CNChinese Academy of Medical Sciences & Peking Union Medical College · CNGuangxi Institute of Botany · CNBiotechnology Research Institute · CNChinese Academy of Sciences · CNGuangxi University of Chinese Medicine · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSiraitia grosvenorii (Swingle) C. Jeffrey, also known as Luohanguo or monk fruit, is a famous traditional Chinese medicine ingredient with important medicinal value and broad development prospects. Diploid S. grosvenorii has too many seeds, which will increase the utilization cost of active ingredients. Thus, studying the molecular mechanism of seed abortion in triploid S. grosvenorii, identifying the abortion-related genes, and regulating their expression will be a new direction to obtain seedless S. grosvenorii. Herein, we examined the submicroscopic structure of triploid S. grosvenorii seeds during abortion.

resultsUpon measuring the endogenous hormone content, we found that abscisic acid (ABA) and trans-zeatin (ZR) levels were significantly downregulated after days 15 and 20 of flowering. RNA sequencing of triploid seeds at different developmental stages was performed to identify key genes regulating abortion in triploid S. grosvenorii seeds. Multiple genes with differential expression between adjacent stages were identified; seven genes were differentially expressed across all stages. Weight gene co-expression network analysis revealed that the enhancement of monoterpene and terpene metabolic processes might lead to seed abortion by reducing the substrate flow to ABA and ZR.

conclusionsThese findings provide insights into the gene-regulatory network of seed abortion in triploid S. grosvenorii from different perspectives, thereby facilitating the innovation of the breeding technology of S. grosvenorii.

Indexed as

CucurbitaceaeTranscriptomeFruitGene Expression Regulation, PlantPlant BreedingSeedsTriploidyGene-regulatory networkPlant hormonesSeed abortionSiraitia grosvenoriiTranscriptome

Identifiers

PMID35382733
PMCPMC8981669
OpenAlexW4223571111

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.