Evidence map›Paper›PMID 35381003›Full record

ArticlePloS one2022

Multiple metals influence distinct properties of the Arabidopsis circadian clock.

Jessica K Hargreaves, Rachael J Oakenfull, Amanda M Davis, Freya Pullen, Marina I Knight, Jon W Pitchford, Seth J Davis

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.8field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Review
  2. A Compensated Clock: Temperature and Nutritional Compensation Mechanisms Across Circadian Systems.BioEssays : news and reviews in molecular, cellular and developmental biology · 2025
    Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Jessica K HargreavesDepartment of Mathematics, University of York, York, United Kingdom.ORCID 0000-0002-7173-7902
Rachael J OakenfullDepartment of Biology, University of York, York, United Kingdom.
Amanda M DavisDepartment of Biology, University of York, York, United Kingdom.ORCID 0000-0001-8463-1667
Freya PullenDepartment of Biology, University of York, York, United Kingdom.
Marina I KnightDepartment of Mathematics, University of York, York, United Kingdom.
Jon W PitchfordDepartment of Mathematics, University of York, York, United Kingdom.
Seth J DavisDepartment of Biology, University of York, York, United Kingdom.ORCID 0000-0001-5928-9046
University of York · GBHenan University · CN

Funding

Biotechnology and Biological Sciences Research Council BB/N018540/1Biotechnology and Biological Sciences Research Council BB/V006665/1
6 · The paper itself

Abstract

Circadian rhythms coordinate endogenous events with external signals, and are essential to biological function. When environmental contaminants affect these rhythms, the organism may experience fitness consequences such as reduced growth or increased susceptibility to pathogens. In their natural environment plants may be exposed to a wide range of industrial and agricultural soil pollutants. Here, we investigate how the addition of various metal salts to the root-interaction environment can impact rhythms, measured via the promoter:luciferase system. The consequences of these environmental changes were found to be varied and complex. Therefore, in addition to traditional Fourier-based analyses, we additionally apply novel wavelet-based spectral hypothesis testing and clustering methodologies to organize and understand the data. We are able to classify broad sets of responses to these metal salts, including those that increase, and those that decrease, the period, or which induce a lack of precision or disrupt any meaningful periodicity. Our methods are general, and may be applied to discover common responses and hidden structures within a wide range of biological time series data.

Indexed as

ArabidopsisArabidopsis ProteinsCircadian ClocksCircadian RhythmSaltsArabidopsis ProteinsSalts

Identifiers

PMID35381003
PMCPMC8982871
OpenAlexW4226023347

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.