Evidence map›Paper›PMID 35380459›Full record

ArticleJournal of virology2022

An Unusual Aspartic Acid Cluster in the Reovirus Attachment Fiber σ1 Mediates Stability at Low pH and Preserves Trimeric Organization.

Giulia Glorani, Max Ruwolt, Nicole Holton, Bernhard Loll, Ursula Neu

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.2field-weighted citation impact, top 51% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 2 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Giulia GloraniFreie Universität Berlin, Institute for Chemistry and Biochemistry, Biochemistry of Viruses, Berlin, Germany.ORCID 0000-0002-4191-1092
Max RuwoltFreie Universität Berlin, Institute for Chemistry and Biochemistry, Biochemistry of Viruses, Berlin, Germany.
Nicole HoltonFreie Universität Berlin, Institute for Chemistry and Biochemistry, Biochemistry of Viruses, Berlin, Germany.
Bernhard LollFreie Universität Berlin, Institute for Chemistry and Biochemistry, Laboratory of Structural Biology, Berlin, Germany.ORCID 0000-0001-7928-4488
Ursula NeuFreie Universität Berlin, Institute for Chemistry and Biochemistry, Biochemistry of Viruses, Berlin, Germany.ORCID 0000-0001-6852-0879
Freie Universität Berlin · DELeibniz-Forschungsinstitut für Molekulare Pharmakologie · DEMax Delbrück Center · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The reovirus attachment protein σ1 mediates cell attachment and receptor binding and is thought to undergo conformational changes during viral disassembly. σ1 is a trimeric filamentous protein with an α-helical coiled-coil tail, a triple-β-spiral body, and a globular head. At the trimer interface, the head domain features an unusual and conserved aspartic acid cluster, which forms the only significant intratrimer interactions in the head and must be protonated to allow trimer formation. To define the role of pH on σ1 stability and conformation, we tested its domains over a wide range of pH values. We show that all domains of σ1 are remarkably thermostable, even at the low pH of the stomach. We determined the optimal pH for stability to be between pHs 5 and 6, a value close to the pH of the endosome and of the jejunum. The σ1 head is stable at acidic and neutral pH but detrimerizes at basic pH. When Asp

Indexed as

Aspartic AcidReoviridaeViral Nonstructural ProteinsHumansHydrogen-Ion ConcentrationPolymersProtein StabilityReoviridae InfectionsAspartic AcidPolymerssigma 1NS protein, ReovirusViral Nonstructural Proteinsaspartic acid clusterenteric virusesreovirusthermostabilityσ1

Identifiers

PMID35380459
PMCPMC9044935
OpenAlexW4224989467

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.