Evidence map›Paper›PMID 35380340›Full record

ArticleInternational journal of computer assisted radiology and surgery2022

Registration of trans-perineal template mapping biopsy cores to volumetric ultrasound.

Tajwar Abrar Aleef, Qi Zeng, W James Morris, S Sara Mahdavi, Septimiu E Salcudean

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Article in International journal of computer assisted radiology and surgery, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Robotically controlled three-dimensional micro-ultrasound for prostate biopsy guidance.International journal of computer assisted radiology and surgery · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Tajwar Abrar AleefSchool of Biomedical Engineering, University of British Columbia, Vancouver, BC, Canada. tajwaraleef@ece.ubc.ca.ORCID http://orcid.org/0000-0001-6512-9591
Qi ZengDepartment of Electrical and Computer Engineering, University of British Columbia, Vancouver, BC, Canada.ORCID http://orcid.org/0000-0001-5495-8896
W James MorrisRadiation Oncologist (retired), BC Cancer - Vancouver Centre, Vancouver, BC, Canada.
S Sara MahdaviDepartment of Medical Physics, BC Cancer - Vancouver Centre, Vancouver, BC, Canada.ORCID http://orcid.org/0000-0001-6823-598X
Septimiu E SalcudeanSchool of Biomedical Engineering, University of British Columbia, Vancouver, BC, Canada.ORCID http://orcid.org/0000-0001-8826-8025

Funding

CIHR CIHR MOP-1422439CIHR CIHR PJT 152965
6 · The paper itself

Abstract

purposePathology from trans-perineal template mapping biopsy (TTMB) can be used as labels to train prostate cancer classifiers. In this work, we propose a framework to register TTMB cores to advanced volumetric ultrasound data such as multi-parametric transrectal ultrasound (mpTRUS).

methodsThe framework has mainly two steps. First, needle trajectories are calculated with respect to the needle guiding template-considering deflections in their paths. In standard TTMB, a sparsely sampled ultrasound volume is taken prior to the procedure which contains the template overlaid on top of it. The position of this template is detected automatically, and the cores are mapped following the calculated needle trajectories. Second, the TTMB volume is aligned to the mpTRUS volume by a two-step registration method. Using the same transformations from the registration step, the cores are registered from the TTMB volume to the mpTRUS volume.

resultsTTMB and mpTRUS of 10 patients were available for this work. The target registration errors (TRE) of the volumes using landmarks picked by three research assistants (RA) and one radiation oncologist (RO) were on average 1.32 ± 0.7 mm and 1.03 ± 0.6 mm, respectively. Additionally, on average, our framework takes only 97 s to register the cores.

conclusionOur proposed framework allows a quick way to find the spatial location of the cores with respect to volumetric ultrasound. Furthermore, knowing the correct location of the pathology will facilitate focal treatment and will aid in training imaging-based cancer classifiers.

Indexed as

ProstateProstatic NeoplasmsBiopsyHumansImage-Guided BiopsyMaleUltrasonographyBiopsy corempTRUSProstate cancerRegistrationTTMB

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.