Evidence map›Paper›PMID 35379994›Full record

ArticleNature neuroscience2022

Exome sequencing of individuals with Huntington's disease implicates FAN1 nuclease activity in slowing CAG expansion and disease onset.

Branduff McAllister, Jasmine Donaldson, Caroline S Binda, Sophie Powell, Uroosa Chughtai, Gareth Edwards, Joseph Stone, Sergey Lobanov, Linda Elliston, Laura-Nadine Schuhmacher and 24 more

Open access · hybridAbstract read
In one paragraph

Article in Nature neuroscience, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
7.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 82 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Somatic CRISPR editing ofbioRxiv : the preprint server for biology · 2026
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  13. Review
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  15. Article
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  17. Review
  18. Article
  19. Emerging drivers of DNA repeat expansions.Biochemical Society transactions · 2025
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

34 authors at 8 institutions in 3 countries.

Branduff McAllister *Division of Psychological Medicine and Clinical Neurosciences, Cardiff University, Cardiff, UK.ORCID http://orcid.org/0000-0001-6308-2136
Jasmine Donaldson *Division of Psychological Medicine and Clinical Neurosciences, Cardiff University, Cardiff, UK.ORCID http://orcid.org/0000-0001-6699-0674
Caroline S BindaDivision of Psychological Medicine and Clinical Neurosciences, Cardiff University, Cardiff, UK.
Sophie PowellDivision of Psychological Medicine and Clinical Neurosciences, Cardiff University, Cardiff, UK.ORCID http://orcid.org/0000-0002-6507-6079
Uroosa ChughtaiDivision of Psychological Medicine and Clinical Neurosciences, Cardiff University, Cardiff, UK.ORCID http://orcid.org/0000-0001-8110-7114
Gareth EdwardsDivision of Psychological Medicine and Clinical Neurosciences, Cardiff University, Cardiff, UK.
Joseph StoneDivision of Psychological Medicine and Clinical Neurosciences, Cardiff University, Cardiff, UK.ORCID http://orcid.org/0000-0003-0767-385X
Sergey LobanovDivision of Psychological Medicine and Clinical Neurosciences, Cardiff University, Cardiff, UK.ORCID http://orcid.org/0000-0002-3126-1903
Linda EllistonDivision of Psychological Medicine and Clinical Neurosciences, Cardiff University, Cardiff, UK.
Laura-Nadine SchuhmacherDivision of Psychological Medicine and Clinical Neurosciences, Cardiff University, Cardiff, UK.
Elliott ReesDivision of Psychological Medicine and Clinical Neurosciences, Cardiff University, Cardiff, UK.
Georgina MenziesSchool of Biosciences, Cardiff University, Cardiff, UK.ORCID http://orcid.org/0000-0002-6600-6507
Marc CiosiInstitute of Molecular, Cell and Systems Biology, University of Glasgow, Glasgow, UK.ORCID http://orcid.org/0000-0002-7663-4080
Alastair MaxwellInstitute of Molecular, Cell and Systems Biology, University of Glasgow, Glasgow, UK.
Michael J ChaoMolecular Neurogenetics Unit, Center for Genomic Medicine, Massachusetts General Hospital and Department of Neurology, Blavatnik Institute, Harvard Medical School, Boston, MA, USA.
Eun Pyo HongMolecular Neurogenetics Unit, Center for Genomic Medicine, Massachusetts General Hospital and Department of Neurology, Blavatnik Institute, Harvard Medical School, Boston, MA, USA.ORCID http://orcid.org/0000-0001-7789-686X
Diane LucenteMolecular Neurogenetics Unit, Center for Genomic Medicine, Massachusetts General Hospital and Department of Neurology, Blavatnik Institute, Harvard Medical School, Boston, MA, USA.
Vanessa WheelerMolecular Neurogenetics Unit, Center for Genomic Medicine, Massachusetts General Hospital and Department of Neurology, Blavatnik Institute, Harvard Medical School, Boston, MA, USA.
Jong-Min LeeMolecular Neurogenetics Unit, Center for Genomic Medicine, Massachusetts General Hospital and Department of Neurology, Blavatnik Institute, Harvard Medical School, Boston, MA, USA.ORCID http://orcid.org/0000-0001-5799-0787
Marcy E MacDonaldMolecular Neurogenetics Unit, Center for Genomic Medicine, Massachusetts General Hospital and Department of Neurology, Blavatnik Institute, Harvard Medical School, Boston, MA, USA.
Jeffrey D LongDepartments of Psychiatry and Biostatistics, University of Iowa, Iowa City, IA, USA.ORCID http://orcid.org/0000-0001-7181-9652
Elizabeth H AylwardSeattle Children's Research Institute, Seattle, WA, USA.
G Bernhard LandwehrmeyerDepartment of Neurology, University of Ulm, Ulm, Germany.
Anne E RosserBrain Repair Group, Schools of Medicine and Biosciences, Cardiff University, Cardiff, UK.
REGISTRY Investigators of the European Huntington’s disease network
Jane S PaulsenUniversity of Wisconsin, Madison, WI, USA.
PREDICT-HD Investigators of the Huntington Study Group
Nigel M WilliamsDivision of Psychological Medicine and Clinical Neurosciences, Cardiff University, Cardiff, UK.
James F GusellaMolecular Neurogenetics Unit, Center for Genomic Medicine, Massachusetts General Hospital and Department of Neurology, Blavatnik Institute, Harvard Medical School, Boston, MA, USA.
Darren G MoncktonInstitute of Molecular, Cell and Systems Biology, University of Glasgow, Glasgow, UK.ORCID http://orcid.org/0000-0002-8298-8264
Nicholas D AllenSchool of Biosciences, Cardiff University, Cardiff, UK.ORCID http://orcid.org/0000-0003-4009-186X
Peter HolmansDivision of Psychological Medicine and Clinical Neurosciences, Cardiff University, Cardiff, UK.ORCID http://orcid.org/0000-0003-0870-9412
Lesley JonesDivision of Psychological Medicine and Clinical Neurosciences, Cardiff University, Cardiff, UK. jonesl1@cardiff.ac.uk.ORCID http://orcid.org/0000-0002-3007-4612
Thomas H MasseyDivision of Psychological Medicine and Clinical Neurosciences, Cardiff University, Cardiff, UK. masseyt1@cardiff.ac.uk.ORCID http://orcid.org/0000-0002-9804-2131
Cardiff University · GBBroad Institute · USHarvard University · USUniversity of Glasgow · GBUK Dementia Research Institute · GBUniversity of Wisconsin–Madison · USUniversität Ulm · DEUniversity of Iowa · US

Funding

NEUROBIOLOGICAL PREDICTORS OF HUNTINGTON'S DISEASER01NS040068 · NINDS · UNIVERSITY OF IOWA · PI PAULSEN, JANE S · 2001 to 2013
$48.5M
Huntington's Disease Repeat Instability and PathogenesisR01NS049206 · NINDS · MASSACHUSETTS GENERAL HOSPITAL · PI VANESSA C WHEELER · 2005 to 2026
$10.0M
Disease-Modifying Genes in Huntington's DiseaseR01NS091161 · NINDS · MASSACHUSETTS GENERAL HOSPITAL · PI JAMES F GUSELLA · 2015 to 2026
$7.2M
Genetic modifiers of Predict-HD phenotypesU01NS082079 · NINDS · MASSACHUSETTS GENERAL HOSPITAL · PI GUSELLA, JAMES F · 2013 to 2015
$2.6M
Genetic foundation for complete mutant allele-specific CRISPR in neurodegenerative diseasesR01NS105709 · NINDS · MASSACHUSETTS GENERAL HOSPITAL · PI LEE, JONG-MIN · 2018 to 2022
$2.4M
Medical Research Council MC_EX_MR/N50192X/1Medical Research Council MR/L010305/1Medical Research Council MR/P001629/1NINDS NIH HHS R01 NS040068NINDS NIH HHS R01 NS049206NINDS NIH HHS R01 NS091161NINDS NIH HHS R01 NS105709NINDS NIH HHS U01 NS082079Wellcome TrustWellcome Trust 109088/Z/15A
6 · The paper itself

Abstract

The age at onset of motor symptoms in Huntington's disease (HD) is driven by HTT CAG repeat length but modified by other genes. In this study, we used exome sequencing of 683 patients with HD with extremes of onset or phenotype relative to CAG length to identify rare variants associated with clinical effect. We discovered damaging coding variants in candidate modifier genes identified in previous genome-wide association studies associated with altered HD onset or severity. Variants in FAN1 clustered in its DNA-binding and nuclease domains and were associated predominantly with earlier-onset HD. Nuclease activities of purified variants in vitro correlated with residual age at motor onset of HD. Mutating endogenous FAN1 to a nuclease-inactive form in an induced pluripotent stem cell model of HD led to rates of CAG expansion similar to those observed with complete FAN1 knockout. Together, these data implicate FAN1 nuclease activity in slowing somatic repeat expansion and hence onset of HD.

Indexed as

EndodeoxyribonucleasesExodeoxyribonucleasesHuntington DiseaseTrinucleotide Repeat ExpansionAge of OnsetExomeExome SequencingGenome-Wide Association StudyHumansHuntingtin ProteinMultifunctional EnzymesEndodeoxyribonucleasesExodeoxyribonucleasesFAN1 protein, humanHuntingtin ProteinMultifunctional Enzymes

Identifiers

PMID35379994
PMCPMC8986535
OpenAlexW4223421933

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.