Evidence map›Paper›PMID 35379333›Full record

ArticleCancer & metabolism2022

Identification of novel lipid biomarkers in xmrk- and Myc-induced models of hepatocellular carcinoma in zebrafish.

Jerry D Monroe, Daniel Fraher, Xiaoqian Huang, Natalie A Mellett, Peter J Meikle, Andrew J Sinclair, Seth T Lirette, Nita J Maihle, Zhiyuan Gong, Yann Gibert

Open access · goldAbstract read
In one paragraph

Article in Cancer & metabolism, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 52% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Review
  2. Zebrafish as a Model for Lipidomics and Similar Investigations.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 3 countries.

Jerry D Monroe *Department of Cell and Molecular Biology, Cancer Center and Research Institute, University of Mississippi Medical Center, Jackson, MS, 39216, USA.
Daniel Fraher *Metabolic Genetic Diseases Laboratory, Metabolic Research Unit, Deakin University School of Medicine, 75 Pigdons Road, Geelong, VIC, 3216, Australia.
Xiaoqian Huang *Department of Biological Sciences, National University of Singapore, Singapore, Singapore.
Natalie A MellettBaker Heart and Diabetes Institute, 75 Commercial Road, Melbourne, VIC, 3004, Australia.
Peter J MeikleBaker Heart and Diabetes Institute, 75 Commercial Road, Melbourne, VIC, 3004, Australia.
Andrew J SinclairDepartment of Nutrition, Dietetics and Food, Monash University, Notting Hill, VIC, 3168, Australia.
Seth T LiretteDepartment of Data Science, University of Mississippi Medical Center, Jackson, MS, 39216, USA.
Nita J MaihleDepartment of Cell and Molecular Biology, Cancer Center and Research Institute, University of Mississippi Medical Center, Jackson, MS, 39216, USA.
Zhiyuan GongDepartment of Biological Sciences, National University of Singapore, Singapore, Singapore. dbsgzy@nus.edu.sg.
Yann GibertDepartment of Cell and Molecular Biology, Cancer Center and Research Institute, University of Mississippi Medical Center, Jackson, MS, 39216, USA. ygibert@umc.edu.ORCID http://orcid.org/0000-0001-8208-7223
University of Mississippi Medical Center · USBaker Heart and Diabetes Institute · AUNational University of Singapore · SGDeakin University · AUJackson Memorial Hospital · USMonash University · AU

Funding

Tracking and Evaluation CoreU54GM115428 · NIGMS · UNIVERSITY OF MISSISSIPPI MED CTR · PI JONES, ALAN E · 2016 to 2025
$38.2M
Role of obesity in preeclamptic pregnancy.P20GM121334 · NIGMS · UNIVERSITY OF MISSISSIPPI MED CTR · PI Pier Paolo Claudio, Babbette LaMarca · 2017 to 2026
$26.4M
The role of leptin in autoimmune-associated hypertensionP20GM104357 · NIGMS · UNIVERSITY OF MISSISSIPPI MED CTR · PI HALL, JOHN E · 2013 to 2022
$23.4M
Mechanisms responsible for tooth morphogenesis in vertebratesR01DE029803 · NIDCR · UNIVERSITY OF MISSISSIPPI MED CTR · PI GIBERT, YANN · 2021 to 2025
$1.8M
Ministry of Education - Singapore R154000B70114Ministry of Education - Singapore R154000B88112NIGMS NIH HHS U54 GM115428NIH HHS DE029803NIH HHS GM104357NIH HHS GM115428NIH HHS GM121334
6 · The paper itself

Abstract

backgroundHepatocellular carcinoma (HCC) is the predominant form of liver cancer and is accompanied by complex dysregulation of lipids. Increasing evidence suggests that particular lipid species are associated with HCC progression. Here, we aimed to identify lipid biomarkers of HCC associated with the induction of two oncogenes, xmrk, a zebrafish homolog of the human epidermal growth factor receptor (EGFR), and Myc, a regulator of EGFR expression during HCC.

methodsWe induced HCC in transgenic xmrk, Myc, and xmrk/Myc zebrafish models. Liver specimens were histologically analyzed to characterize the HCC stage, Oil-Red-O stained to detect lipids, and liquid chromatography/mass spectrometry analyzed to assign and quantify lipid species. Quantitative real-time polymerase chain reaction was used to measure lipid metabolic gene expression in liver samples. Lipid species data was analyzed using univariate and multivariate logistic modeling to correlate lipid class levels with HCC progression.

resultsWe found that induction of xmrk, Myc and xmrk/Myc caused different stages of HCC. Lipid deposition and class levels generally increased during tumor progression, but triglyceride levels decreased. Myc appears to control early HCC stage lipid species levels in double transgenics, whereas xmrk may take over this role in later stages. Lipid metabolic gene expression can be regulated by either xmrk, Myc, or both oncogenes. Our computational models showed that variations in total levels of several lipid classes are associated with HCC progression.

conclusionsThese data indicate that xmrk and Myc can temporally regulate lipid species that may serve as effective biomarkers of HCC progression.

Indexed as

CancerHepatocarcinomaLipidomicsLipidsLiverMycTransgenic oncogene modelsxmrkZebrafish

Identifiers

PMID35379333
PMCPMC8981695
OpenAlexW4226085418

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.