Evidence map›Paper›PMID 35378790›Full record

ArticleBioMed research international2022

Identification of lncRNAs and Their Regulatory Relationships with mRNAs in Response to

Rui Gao, Guotai Yao, Xiaolie Wang, Yilin Wang, Wenting Lin, Liang Teng, Yan Wang, Yi Jin, Zhongzhi Wang, Jianghan Chen

Open access · hybridAbstract read
In one paragraph

Article in BioMed research international, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 57% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Rui GaoDepartment of Dermatology, Changzheng Hospital, Naval Medical University, No. 415 Fengyang Road, Shanghai 200003, China.
Guotai YaoDepartment of Dermatology, Changzheng Hospital, Naval Medical University, No. 415 Fengyang Road, Shanghai 200003, China.
Xiaolie WangDepartment of Dermatology, Changzheng Hospital, Naval Medical University, No. 415 Fengyang Road, Shanghai 200003, China.
Yilin WangDepartment of Dermatology, Changzheng Hospital, Naval Medical University, No. 415 Fengyang Road, Shanghai 200003, China.
Wenting LinDepartment of Dermatology, Changzheng Hospital, Naval Medical University, No. 415 Fengyang Road, Shanghai 200003, China.
Liang TengDepartment of Dermatology, Changzheng Hospital, Naval Medical University, No. 415 Fengyang Road, Shanghai 200003, China.
Yan WangDepartment of Dermatology, Changzheng Hospital, Naval Medical University, No. 415 Fengyang Road, Shanghai 200003, China.
Yi JinDepartment of Dermatology, Changzheng Hospital, Naval Medical University, No. 415 Fengyang Road, Shanghai 200003, China.
Zhongzhi WangDepartment of Dermatology, Shanghai Skin Disease Hospital, Tongji University School of Medicine, Shanghai 200443, China.ORCID https://orcid.org/0000-0002-4533-8414
Jianghan ChenDepartment of Dermatology, Changzheng Hospital, Naval Medical University, No. 415 Fengyang Road, Shanghai 200003, China.ORCID https://orcid.org/0000-0002-1257-6686
Shanghai Changzheng Hospital · CNTongji University · CNThird Affiliated Hospital of Southern Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Aims: Cryptococcosis is an invasive fungal disease that is associated with an increasing prevalence along with a very high fatality and is primarily caused by Cryptococcus. However, its mechanism to cause pathogenicity is not yet completely understood. In this study, we aim to screen the lncRNA markers in human monocytic (THP-1) cells infected by Methods: We initially conducted an lncRNA microarray analysis of the THP-1 cells infected by C. neoformans and normal THP-1 cells. Based upon these data, RT-qPCR was used to verify the expressions of the selected lncRNAs and mRNAs. We then performed functional and pathway enrichment analyses. Lastly, target prediction was performed by using the lncRNA target tool which was based on the differentially expressed lncRNAs. Results: We determined 81 upregulated and 96 downregulated lncRNAs using microarray. In addition, the profiling data showed 42 upregulated and 57 downregulated genes and discovered that neuroactive ligand-receptor interaction, tyrosine metabolism, and phenylalanine metabolism are extremely impaired in the regulation of Conclusion: The current study analyzed the differential lncRNAs and mRNAs in

Indexed as

CryptococcosisRNA, Long NoncodingCryptococcus neoformansGene Expression ProfilingGene Regulatory NetworksHumansRNA, MessengerTHP-1 CellsRNA, Long NoncodingRNA, Messenger

Identifiers

PMID35378790
PMCPMC8976626
OpenAlexW4220912235

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.